Symphalangus syndactylus (siamang): 129463083
Help
Entry
129463083 CDS
T10134
Symbol
POLR1A
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129463083 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssyn03021
]
129463083 (POLR1A)
Enzymes [BR:
ssyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129463083 (POLR1A)
Transcription machinery [BR:
ssyn03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129463083 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box
Motif
Other DBs
NCBI-GeneID:
129463083
NCBI-ProteinID:
XP_055099566
LinkDB
All DBs
Position
14:complement(37044909..37124878)
Genome browser
AA seq
1728 aa
AA seq
DB search
MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSAHGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERILNRGVFLFVFQFLEENADPSASEIQEELEQYTTEIVQNK
LLGSQGAHVKNVCESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAMVH
RTAGQKDSEPLGIEEAQTGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDDMESRF
NPSVFFLDFLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIQKLLALMAQEQKLP
EKVAAPTTDEEKDSLIATDQSFLSVLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMMD
KYPGIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPV
TPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPATGAPKP
QGTKIVCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGD
EVNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCXFTREQ
YMELVYRGLTDKVGHVKLLSPSILKPFLLWTGKQVVSTLPINIIPEDHIHLNLSGKAKIT
GKAWVKETPRSIPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYSLVHCCYEIYGGE
TSGKVLTCLARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPRAVRAALN
LPEAASYDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPEN
SLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVT
GRFLTSIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDG
SVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRADPKKALRYFRAI
KRWQSKHPNTLLRRGAFLSYSQKIQEAVKALNLESENRNGRIPRTQEMLRMWYELDEESR
RKYQKKAATCPDPSLSVWRPDIYFASVSETFETKVDDYGQEWAAQTEKSYEKSELSLDRL
RTLLQLKWQRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREIL
MVASANIKTPMMSVPVLNTKKALKRVKSLKKPLTRVCLGEVLQKIDVQESFCMEEKQNKF
RVYQLRFQFLPHAYYQQEKCLRPEDILRFIETRFFKLLMESIKKKNNKASAFRSVNTRRA
TQRDLDNAGESRRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEE
EEREDEENDDEDMQEERNPHREGARKTREQDEEVGSGAEEDPSLPALLTQPRKPTHSQEP
QGPEAMERRVQAVREIHSFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAV
IYATKGITRCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRHLYSNDIHAMANTY
GIEAVLWVIEKEIKDVFAVYGIVVDPRHLFLVADYMCFEGVYKPLNRFGIRSNSSPLQQM
TFETSFQFLKQATLLGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5186 nt
NT seq
+upstream
nt +downstream
nt
atgttgatctccaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggctgaagagctcaagaaattaagtgttaaatccattacgaaccctcggtacctggac
agcctggggaacccatcggcacacggcctgtacgatttagctttgggccctgcagattcc
aaagaggtgtgctccacctgcgtgcaggacttcagcaactgttctgggcacctgggccac
attgagctcccactcacggtgtataaccctctcctcttcgataagctgtacctgctgctt
cggggctcttgtttaaactgccacatgctgacttgtccccgggctgtgattcacctctta
ctctgccagctgagggttctggaagtcggggccctacaagcagtctacgagcttgagaga
attctgaacaggggagttttcctctttgttttccagtttctggaagaaaacgccgatccc
tctgcctctgaaattcaggaggaattagaacaatacacaactgaaattgtgcagaacaag
ctcctggggtcccagggcgcacatgtgaagaacgtgtgtgagagcaagagcaagctcatt
gctctcttctggaaggcacatatgaatgctaagcgctgtccccactgcaagaccgggcga
tccgttgtccgaaaggaacacaacagcaagttgactatcacgtttccagccatggtgcac
aggacagctggccagaaggactcggaacccctgggaattgaggaagctcagacgggaaaa
cgaggatacttaacacccaccagtgcccgcgaacacctttctgccctgtggaagaatgaa
ggattctttctgaactaccttttttcgggaatggatgatgatgatatggagtccagattc
aatccgagtgtgttctttctagatttcttggtggtgccgccctcaaggtatcgcccagtc
agtcgcctaggagaccagatgtttaccaatggccagacggtgaacttgcaggctgtcatg
aaggatgtagttctgattcaaaaacttctggcattgatggcccaagaacagaagctgcca
gagaaagtggccgcacccactacagatgaggaaaaagactctttgattgctactgaccaa
tcctttttgagtgtacttccaggccagtccctcatagacaaactttacaacatttggatt
cgccttcagagccatgtcaatattgtgtttgatagcgagatggacaaactaatgatggac
aagtacccaggcattaggcagatcctggagaagaaagaaggcctgttccgaaaacacatg
atgggaaagcgagtggactacgctgcgcgctcagtcatctgcccagacatgtacatcaac
accaatgaaattggaattcccatggtgtttgccacaaaactgacctacccgcagccagtt
accccgtggaatgttcaggaacttaggcaagcagtcatcaacggccccaatgtgcaccca
ggagcctccatggtcatcaatgaggacggcagccgcacagccctgagcgctgtggacatg
actcagcgagaggccgtggccaagcagctcctgaccccagccacgggggcacctaagccc
caggggacaaaaattgtgtgccggcatgtgaagaatggggacattctgctactgaaccga
cagcccaccctgcacagaccctccatccaggcccaccgtgcccgcatcctgcctgaagag
aaagtgctgcggctccactatgccaactgcaaggcctataatgccgactttgatggagac
gaggtgaatgcccatttcccccagagtgagctgggccgggccgaggcctacgtcctggcc
tgcaccgatcagcagtaccttgttcccaaggatggccaaccattggcgggactgatccag
gatcacatggtttcaggggcaagcatgactactcggggttgcttttcacccgggagcagt
atatggagctggtgtaccgaggactcacggacaaagtggggcacgtgaagctcctttctc
cttccatcctgaagccctttctgctgtggacaggaaaacaggttgtgtcaacgctgccca
taaatataatcccagaggaccacatccacctgaatttatctggaaaggcaaaaatcaccg
ggaaagcctgggtgaaggaaactcctcgatccattcctggctttaaccctgactcaatgt
gcgagtcccaggtgatcatcagggaaggggagctgctctgcggagtgctggacaaggcgc
actacgggagctctgcctacagcctggtccactgctgctatgagatctatggaggcgaga
ccagcggcaaggttctaacctgcctggcccgcctcttcactgcctacctgcagctctaca
gaggcttcacgttgggcgtggaagacattttggtgaagccaaaggcagatgtcaagaggc
aacgtatcattgaagaatccacccactgcgggccccgggctgtcagggctgcattaaacc
tgccagaagccgcatcctatgatgaggtccgaggaaaatggcaggatgcccatctgggca
aggaccagagggattttaacatgattgatctgaagttcaaggaggaagtgaaccattaca
gcaatgagattaacaaggcatgcatgccttttggcctacacagacagttcccagagaaca
gcctgcagatgatggtgcagtcaggagccaaaggttcaaccgtgaacacaatgcagatct
cgtgcctgctgggccagattgaattggaaggtcggagacccccgctgatggcgtctggca
agtcactgccctgctttgagccttatgagttcacccccagggctggtggctttgtcactg
gcagattcctcaccagcatcaaacctcctgagttcttcttccactgcatggcaggacgag
agggcctggtcgacactgctgtgaaaaccagccgctcaggctatctccaaaggtgcatca
tcaagcacctggagggactggtcgtgcagtatgatctcacggtccgtgacagtgacggca
gtgtggtgcagttcctgtatggggaggatggcctggacatccccaagacacaattcctgc
agcccaagcagttccccttcctggccagcaactacgaggtgataatgaaatcacagcatc
tccatgaagttttatccagagcagatcccaaaaaagctctccgctacttcagagctatca
aaagatggcaaagcaagcaccccaacaccctgctgagaagaggtgccttcttgagttatt
cccagaaaattcaggaagctgtgaaagccctgaatcttgagagtgaaaaccgcaatggcc
gcatccccaggactcaggagatgctgaggatgtggtatgagttggatgaggagagccgaa
ggaaataccagaagaaggcggccacttgtcctgacccaagtctgtctgtctggcgtcctg
acatctactttgcgtcagtgtcagaaacatttgaaacaaaggttgatgactacggtcaag
agtgggcagctcaaacagagaagagttatgagaaatcagagctttctctcgacaggttga
ggaccttgctgcaactgaagtggcagcgctcactgtgcgagccaggcgaggccgtgggcc
tgctggctgcccagagcatcggagagccctccacccagatgaccctcaacaccttccact
ttgcaggcagaggcgagatgaatgtcaccctgggtattccaaggttgcgggagattctca
tggtggccagtgccaacatcaagacgcccatgatgagcgtgcctgtgctcaacaccaaga
aagccctgaagagagtgaaaagcctcaagaagccactcaccagggtgtgcttaggggagg
tgttgcagaaaattgacgtccaggagtccttctgtatggaagaaaaacagaacaaattcc
gggtgtaccagctgcggtttcagttcctgccacatgcatattaccagcaggagaagtgcc
tgagacccgaggacatcctgcgcttcatagaaacaagattctttaaacttctgatggaat
ccatcaaaaagaagaataataaagcatcagccttcaggagcgtaaatactcgaagagcta
ctcagcgggatctggacaacgctggggagtcgaggaggagtcggggagagcaggagggtg
atgaggaagaggaggggcacattgtggatgctgaagctgaggagggggacgccgatgcct
ctgatgccaaacgcaaggagaagcaggaggaggaggttgattatgagagtgaggaagagg
aggagagagaggacgaggagaacgacgatgaagacatgcaggaggaacgaaatccccaca
gggaaggtgctcgaaagacccgagagcaagatgaagaggtgggctcaggcgctgaggagg
acccgtcccttcccgccctcctgacgcagccccggaaacccacccacagccaggagcccc
aggggcccgaggccatggagcgccgggtccaggctgtgcgtgagatccactcgttcatag
atgactaccagtacgacacggaggagagcctgtggtgccaggtgacagtgaagctccctc
tgatgaagatcaactttgacatgagctccctggtagtatctttggcccatggcgccgtca
tctatgcgaccaagggcatcacccggtgcctcctgaatgaaacaaccaacaataagaacg
agaaggagcttgtgctaaacacagaaggaatcaacctcccagagctgttcaagtatgcag
aggtcctggatctgcgccacctctactccaacgacatccacgccatggccaacacgtacg
gcatcgaggccgtgctgtgggtgatcgagaaggagatcaaggatgtgtttgccgtgtatg
gcatcgtggtcgaccctcgccatctcttcctggttgctgattatatgtgctttgagggtg
tctacaagccactgaatcgctttgggatccggtcaaactcttccccgctacagcagatga
catttgaaaccagcttccagtttctgaagcaagccaccctgctgggatcccacgatgagc
tgaggtctccttctgcctgtcttgtggttgggaaggttgtcaagggcgggacaggcctgt
tcgagctcaagcagcccctgagatag
DBGET
integrated database retrieval system
