KEGG   Symphalangus syndactylus (siamang): 129463197
Entry
129463197         CDS       T10134                                 
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform X1
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn03015  mRNA surveillance pathway
ssyn05164  Influenza A
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129463197 (CPSF4L)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    129463197 (CPSF4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssyn03021]
    129463197 (CPSF4L)
   03019 Messenger RNA biogenesis [BR:ssyn03019]
    129463197 (CPSF4L)
Transcription machinery [BR:ssyn03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     129463197 (CPSF4L)
Messenger RNA biogenesis [BR:ssyn03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     129463197 (CPSF4L)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_3 zf-CCCH_4 Nab2-like_zf-CCCH_
Other DBs
NCBI-GeneID: 129463197
NCBI-ProteinID: XP_055099803
LinkDB
Position
14:17596943..17638328
AA seq 242 aa
MSYIGPNCLGSSSFRSPSRRRKMQEVIAGLERFTFAFEKDVEMQKGTGLLPFQGMDKSAS
AVCNFFTKGLCEKGKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYF
YSKFGDCSNKECPFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNYLVGFCPE
GPKCQFAQVLKYEICSRLAQSMLMSRRWEGESWAVIVSLSTSLSPKMNLLLNQTYMKPCL
TA
NT seq 729 nt   +upstreamnt  +downstreamnt
atgagctatattgggcccaactgcctgggttccagcagcttccgcagccccagcaggaga
cggaagatgcaagaggtcatcgcggggctggagcggttcacctttgcctttgagaaggat
gtcgagatgcagaagggcactgggctcctgcctttccagggcatggacaagtcggcctca
gctgtgtgcaacttcttcactaaagggctctgtgagaaagggaaactctgccccttccga
catgaccgaggggagaagatggtggtgtgcaagcactggctccgggggctgtgcaagaag
ggtgatcactgcaagttcctgcaccagtatgacctcaccaggatgcctgagtgctacttc
tactccaagtttggtgactgcagcaacaaggagtgtcccttcctccatgtgaagccagct
ttcaagtcccaggactgtccttggtatgaccaaggtttctgcaaggacggtcctctgtgt
aaataccgccatgtccccagaataatgtgtctcaactatttagttggcttctgccccgag
ggacccaagtgccaatttgctcaggttctgaaatatgaaatctgcagcaggctggcgcag
agcatgttaatgagcagaagatgggagggcgagagctgggctgtaatcgtctctctctcc
acttcccttagtcccaagatgaatcttttactcaaccagacttacatgaagccttgctta
acagcctga

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