Symphalangus syndactylus (siamang): 129464328
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Entry
129464328 CDS
T10134
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129464328 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssyn03041
]
129464328 (DHX15)
03009 Ribosome biogenesis [BR:
ssyn03009
]
129464328 (DHX15)
Enzymes [BR:
ssyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129464328 (DHX15)
Spliceosome [BR:
ssyn03041
]
Complex A
U2 snRNP components
U2 related factors
129464328 (DHX15)
Complex B
129464328 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
129464328 (DHX15)
Ribosome biogenesis [BR:
ssyn03009
]
Eukaryotic type
90S particles
Helicases
129464328 (DHX15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
Cas3-like_C_2
AAA_29
nSTAND3
Flavi_DEAD
AAA_25
AF-4
Motif
Other DBs
NCBI-GeneID:
129464328
NCBI-ProteinID:
XP_055101391
LinkDB
All DBs
Position
16:complement(32290201..32347633)
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AA seq
888 aa
AA seq
DB search
MRQRAGQEFPPLGGVLAHLAHTHTRTHARCGSARARRPSPRRRRHFSCWFRPHRVGCSSG
RGGGPPELSGCPRLCPYSSQLSSLIIARSKTARMSKRHRLDLGEDYPSGKKRAGTDGKDR
DRDRDREDRSKDRDRERDRGDREREREKEKEKELRASTNAMLISAGLPPLKASHSAHSTH
SAHSTHSTHSAHSAHAGHAGHTSLPQCINPFTNLPHTPRYYDILKKRLQLPVWEYKDRFT
DILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVAD
EMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTL
ATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEP
ERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIP
LYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVY
NPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNL
GSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPL
DPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTL
LNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYI
NIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYI
RTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagcgggcgggacaggagttcccgcctttaggcggcgtgctcgcgcacctcgct
cacacgcacactcgcacgcacgcacgctgcggaagcgcgcgcgcgcggaggcccagccct
cgtcgccgccgccattttagctgctggttccggccgcaccgtgtgggctgtagtagcggg
aggggtgggggtcctccagagttaagtggctgtcctcgactgtgcccatacagcagccag
ctttcttccttaataatcgcccgttcgaagactgcgaggatgtccaagcgacaccggttg
gacctaggggaggattacccctctggcaagaagcgtgcggggaccgatgggaaggatcga
gatcgagaccgggatcgtgaagatcggtctaaagatcgagaccgagaacgtgatagagga
gatagagagcgagagagggagaaagaaaaggagaaggagttgcgagcttcaacgaatgct
atgcttatcagtgctggattaccacctttaaaagcttcccattcagctcactcaacccac
tcagcacattcaacgcattcaacacattctgctcattcagcgcacgccggacatgcaggt
cacacgtcacttccacagtgcattaatccgttcaccaacttaccccatactcctcgatac
tatgatattctaaagaaacggcttcagctccctgtttgggaatacaaggataggtttaca
gatattctggttagacatcagtcctttgtactggttggtgagactgggtctggtaaaaca
acacagattccacagtggtgtgtggagtacatgcgatcattaccaggacccaagagagga
gttgcctgtacccaacccaggagagtggctgcaatgagtgtggctcagagagttgctgat
gagatggatgtgatgttgggccaggaagttggttactccattcgatttgaagactgcagt
agtgcaaaaaccattcttaagtatatgactgatgggatgttacttcgtgaagctatgaat
gatcccctcctggagcgttatggtgtaataattcttgatgaggctcatgagaggacactg
gctacagatattctaatgggtgttctgaaggaagttgtaagacagagatcagatttaaag
gttatagttatgagcgctactctagatgcaggaaaattccagatttactttgataactgt
cctctcctaactattcctgggcgtacacatcctgttgagatcttttatactccagaacca
gagagagattatcttgaagcagcaattcgaacagttatccagattcatatgtgtgaagag
gaagagggagatcttcttcttttcttaactggtcaagaggaaattgatgaagcctgtaag
agaataaagcgtgaagttgatgatttgggccctgaagttggcgacattaaaatcattcca
ttgtattctacacttccacctcagcagcagcaacgcatttttgagcctccacctcccaaa
aaacagaatggagcaattggaagaaaggtagttgtgtcaactaacatagcagagacatct
ttgacaatagatggtgtggtgtttgtgattgatcctggatttgcgaaacagaaggtctac
aatcctcgaatcagagttgagtcccttttggtgacagctattagtaaagcttcagctcaa
caaagagctggtcgagctggacgtaccagacctggaaaatgcttcagactttacacagag
aaagcttataaaacggaaatgcaggataacacctatcctgagattttgcgatctaattta
ggatcagttgtgttacaattgaagaaacttggtattgatgatttggtacattttgatttt
atggatccaccagctcctgaaactctgatgagagccctggaacttttgaattatctggct
gctttaaatgatgatggagatctgactgaattgggatccatgatggcagagtttcctcta
gatccacagctcgcaaaaatggttattgcaagttgtgactacaactgttctaatgaggtc
ctatctattactgctatgttgtcagtcccacagtgttttgttcgccccacggaggccaag
aaagccgcagatgaggccaagatgagatttgcccacatagatggagatcatctgacactg
ctgaacgtctaccatgcttttaaacaaaatcatgaatcggttcagtggtgttatgacaac
ttcattaactacaggtccctgatgtccgcagacaatgtacgccagcagctatctcgaatt
atggacagatttaatttgcctcgtcgaagtactgactttacaagcagggactattatatt
aatataagaaaagctttggttactgggtattttatgcaggtggcacatttagaacgaaca
gggcattacttaactgtgaaagataaccaggtggttcagctgcatccctctactgttctt
gaccacaaacctgaatgggtgctttataatgagtttgttctaacaacaaagaattacatc
cggacatgtacagatatcaagccagaatggttggtgaaaattgcccctcaatactatgac
atgagcaatttcccacagtgtgaagcaaagagacagttggaccgcatcattgccaaactt
caatccaaggaatattcacagtactga
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