Symphalangus syndactylus (siamang): 129464778
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Entry
129464778 CDS
T10134
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03030
DNA replication
ssyn03410
Base excision repair
ssyn03420
Nucleotide excision repair
ssyn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129464778 (RFC1)
03410 Base excision repair
129464778 (RFC1)
03420 Nucleotide excision repair
129464778 (RFC1)
03430 Mismatch repair
129464778 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssyn03032
]
129464778 (RFC1)
03400 DNA repair and recombination proteins [BR:
ssyn03400
]
129464778 (RFC1)
DNA replication proteins [BR:
ssyn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129464778 (RFC1)
DNA repair and recombination proteins [BR:
ssyn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129464778 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
Rad17
RuvB_N
AAA_14
AAA_5
BRCT_2
AAA_16
AAA_33
AAA_17
AAA_30
nSTAND3
AAA_18
RNA_helicase
NTPase_1
AAA_7
AAA_19
AAA_28
Motif
Other DBs
NCBI-GeneID:
129464778
NCBI-ProteinID:
XP_055102167
LinkDB
All DBs
Position
16:complement(45981418..46068230)
Genome browser
AA seq
1148 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVSETVKKNEKTKSDEETLKAKKGIKEIKVNSSCKEDDFKQKQLS
KKKRIIYDSDSESEETLQVKNAKKQPEKPPVSSKPGKISRQDPVTYVSETDEEDDFMCKK
AASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK
MVASKRKELSQNTNESGLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
ARKDTEEGETFSSVQANLSKAEKHKYPHKVKTEQFSDERRSYSPRKQSKYESSKESQQHS
KSSADKIGEVSSSKASSKLAIMKRKEESSYKEIEPVASKRKENSIKLKGETKTPKKTKSS
PAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLES
IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
TMPGKKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSKPTSKRDSLAK
TVKKEPDVFWRSLDFKEQVAEEISGDSKARNLADDSSENKVENLLWVDKYKPTSLKTIIG
QQGDQSCANKLLRWLRNWHKSSSEDKKHAAKFGKFSGKDDGCSFKAALLSGPPGVGKTTT
ASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMD
EVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQI
KGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRA
KKDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGD
MKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFP
SWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNVDYLSHLRDALVQPLTSQGVDGVQD
VVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAI
KASRHSTSPTLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRK
GKGKSSKK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattctttggagtaataccaagtggaaagaaacttgtaagtgaaaca
gtaaagaagaatgagaaaacaaagtctgatgaagaaactttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagctcctgtaaagaggatgacttcaaacaaaagcaactaagc
aagaaaaagaggatcatctatgattcagattcagagtcagaggagacattgcaggtaaaa
aatgccaaaaagcaaccagaaaaacctccagtatcttctaaacctggtaaaatttcacgg
caggatcctgttacatacgtttcagaaacagatgaagaagatgactttatgtgtaagaag
gcggcctctaaatcaaaagagaatggaagatctacaaatagtcatcttggaacatcaaac
atgaaaaagaatgaagaaaacactaagaccaagaataagcccttatcaccaataaaactt
acacccacatcagtgcttgattattttggaactggaagtgtccaaagatctaataagaag
atggtggcaagcaaaagaaaagagctttcacaaaatacaaatgagtctggattaaatgat
gaagccatcgccaagcaattacagcttgatgaagatgcggagctggagaggcagttgcat
gaagatgaggagtttgccagaacattagccatgttggatgaagaacccaagaccaaaaag
gctcgaaaggacacagaagagggagaaacattttcatctgtccaagccaatttaagtaaa
gcagaaaaacataaatatcctcataaagtaaaaacagaacaattttcagatgaaagaagg
agctacagtcctaggaagcaaagtaaatacgaaagttcaaaagaatctcagcaacattcc
aagtcatcagctgacaaaataggagaagtctcttcttccaaggccagttctaagctggca
attatgaaaagaaaagaagagagctcttataaagaaatagagcctgtggcctcaaaaaga
aaagaaaattccattaaattgaaaggagagacaaaaactcctaagaaaaccaaaagttct
ccagctaaaaaagagtctgtaagtcctgaagattctgaaaagaaacgcactaattatcaa
gcttatcgaagctacttaaatcgagaaggtcccaaggctctgggctccaaagaaatacca
aagggagctgaaaattgcttggaaggccttatatttgtaatcacaggcgtgctggagtct
attgaacgagatgaggccaagtctctaattgaacgttatgggggaaaagtaacaggaaat
gtcagcaagaaaacaaattatcttgtcatgggtcgtgatagtggacagtccaagagtgat
aaggccgcagccttggggacaaaaattattgatgaagatggcctgttgaatctgattcga
actatgccaggcaagaaatccaagtatgaaatagcagttgaaactgagatgaagaaagag
tccaaactggagagaacaccccaaaaaaatgtccaaggaaaaagaaaaattagtccatct
aaaaaggaatcagaatctaaaaagagcaagccgacttccaaaagggacagtttggcaaag
acggtaaaaaaggaaccagatgtgttttggagaagcctggatttcaaggagcaggtggcc
gaggagataagtggtgacagcaaggctaggaatttggctgatgacagcagtgaaaacaaa
gtggaaaatttgctctgggtggataaatataagccaacctcgctcaagaccataattgga
cagcaaggtgaccagagctgtgccaacaaactcctacgctggctccgaaactggcacaag
agttcttctgaagataaaaaacacgcagcaaagtttggtaaattttctggcaaagatgat
ggctgtagttttaaagcagcgttgctgtcaggccctcctggtgttggcaaaaccaccaca
gcttccctggtgtgtcaggagttgggatacagctacgtggaactgaatgcaagtgacacc
cggagtaagagcagtttgaaggcaattgttgctgagtcactgaacaataccagcatcaaa
ggcttttattcaaatggagcagcctcttcagtaagcacgaaacatgctctcatcatggat
gaagtagatggcatggcaggcaatgaggataggggaggaattcaggaattaattggcctg
ataaaacatactaaaattcccattatttgtatgtgcaatgatagaaatcatcccaagatt
cgctctctggttcattattgttttgatcttcgttttcaaagacctcgggttgaacagatt
aagggtgctatgatgtctattgcatttaaagaaggtttaaagattccccctccagctatg
aatgaaataattttgggagccaatcaagatatcagacaggttttacataatctgagtatg
tggtgtgcacgaagtaaagcattaacctatgaccaggccaaagctgattctcacagagcc
aaaaaggatatcaaaatgggcccatttgatgtcgcccggaaagtgtttgcagctggagag
gagactgctcacatgtcacttgtggacaagtcagatctgttttttcatgattattcaata
gcacccctctttgtccaggaaaattacatacatgtgaagcctgtagcagcagggggtgac
atgaaaaaacacttgatgcttttaagcagagcagcagacagcatatgcgatggtgactta
gtggacagccagatccggagtaagcaaaactggagtcttctgcctacgcaggccatttat
gccagtgttcttcctggagagttgatgagggggtacatgacccagtttcccaccttccca
agctggctggggaagcactcgtccacaggcaaacacgatcgtatcgttcaggacctggcc
ttgcatatgagtctcagaacttactccagcaaaaggactgtaaacgtggattatctgtca
catctaagggatgcacttgtacagcccttgacctcacaaggagtagacggagtacaggat
gttgttgcacttatggacacatattatttgatgaaagaagactttgagaatatcatggaa
atcagcagctggggtggcaaacctagtcccttttcaaagctggatcccaaggtgaaagca
gccttcacgagagcttacaataaggaagcccaccttactccatattcacttcaagctata
aaggcatctagacatagcacaagcccaaccctggattcggaatacaacgaagaattaaat
gaagatgactctcaatctgatgagaaagaccaagatgctatagaaactgatgccatgatc
aagaaaaagacaaaatcttcaaagccttcaaaaccagaaaaagataaggagcccagaaaa
ggaaaaggaaaaagttcgaagaaatga
DBGET
integrated database retrieval system
