Symphalangus syndactylus (siamang): 129465055
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Entry
129465055 CDS
T10134
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1 isoform X2
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04022
cGMP-PKG signaling pathway
ssyn04024
cAMP signaling pathway
ssyn04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
129465055 (CNGA1)
04022 cGMP-PKG signaling pathway
129465055 (CNGA1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
129465055 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssyn04040
]
129465055 (CNGA1)
Ion channels [BR:
ssyn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129465055 (CNGA1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
CDC45
NPR3
EMC3_TMCO1
Zip
Tim54
RNA_polI_A34
GrpE
Sec62
SLC52_ribofla_tr
RR_TM4-6
DDHD
Motif
Other DBs
NCBI-GeneID:
129465055
NCBI-ProteinID:
XP_055102713
LinkDB
All DBs
Position
16:complement(54528744..54616498)
Genome browser
AA seq
690 aa
AA seq
DB search
MKLSMKKNIINTQQSFLTMPNVIVPDIEKEIRRMENGACSSFSEDDDSASISEESENENP
HPRGSFSYKSLRKGGPSQREQYLPGAIALFNVNNSSNKDQEPEDKKKKKKEKKSKSDDKN
ENKNDPEKKKKKKDKEKKKKEEKSKDKKEEEKKEVVVIDPSGNTYYNWLFCITLPVMYNW
TMVIARACFDELQSDYLEYWLILDYISDIVYLIDMFVRTRTGYLEQGLLVKEELKLINKY
KSNLQFKLDVLSLIPTDLLYFKLGWNYPEIRLNRLLRFSRMFEFFQRTETRTNYPNIFRI
SNLVMYIVIIIHWNACVFYSISKAIGFGNDTWVYPDINDPEFGRLARKYVYSLYWSTLTL
TTIGETPPPVRDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQY
MHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIF
ADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSD
GSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGK
QILMKDGLLDLNIANAGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLT
KIEKFLKPLIDTEFSTIEGTGEESGPIDST
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaactatccatgaagaaaaatattatcaatacacagcagtcttttctaaccatgccc
aatgtgattgtaccagatattgaaaaggaaatacgaaggatggaaaatggagcatgcagc
tccttttctgaggatgatgacagtgcctctatatctgaagaatcagagaatgaaaaccct
catccaaggggttcctttagttataagtcactcagaaagggaggaccatcacagagggag
cagtacctgcctggtgccattgcactttttaatgtgaacaacagcagcaataaggaccag
gaaccagaagataaaaagaaaaagaaaaaagaaaagaagagcaaatcagatgataaaaac
gaaaataaaaatgacccggagaagaaaaagaagaaaaaggacaaagagaagaaaaagaaa
gaggagaaaagcaaagataagaaagaagaggagaagaaagaagttgtggttattgatccc
tcaggaaacacatattacaactggctgttttgcatcacattacctgttatgtacaactgg
acaatggttattgccagagcatgttttgatgaacttcaatctgattacctagaatattgg
ctcattttggattacatatcagacatagtctatttaatcgatatgtttgtacgaacaagg
acaggttacctagaacaaggactgctggtaaaggaagaacttaaactcataaataaatat
aaatccaacttgcaatttaaacttgatgttctgtcactgataccaactgatttgctgtat
tttaagttagggtggaactatccagaaattagattaaacaggttgttacggttctctcgt
atgtttgagttcttccagagaacagaaacaaggacaaactatccaaacatcttcaggatt
tccaaccttgttatgtatatcgtcatcattatccactggaatgcatgtgtgttctactct
atttctaaagctattggatttggaaatgatacatgggtctaccctgatattaatgatcct
gaatttggccgtttggctagaaaatatgtatacagcctttactggtctacactgacttta
actaccattggtgaaacaccccctcctgtgagggattctgagtatgtctttgtggtggtt
gatttcctcattggagtgttaatttttgctaccatcgttggtaacataggttctatgatt
tccaacatgaatgcagccagagcagaatttcaagcaagaattgatgctatcaagcaatat
atgcattttcgaaatgtaagcaaagatatggaaaagagggttattaaatggtttgactac
ctgtggaccaacaaaaaaacagttgatgagaaagaagtcttaaagtatctacctgataaa
ctaagagcagaaattgccatcaacgttcacttagacacattaaaaaaggtacgcattttt
gctgattgtgaagctggtctgttggtggagttggtcttgaaattgcaaccccaagtctac
agtcctggagattatatttgcaagaaaggggatatcggacgagagatgtacattatcaag
gaaggcaaacttgctgtggtggcagatgatggagtaactcagtttgtggtattgagcgat
ggcagctacttcggtgagatcagcattcttaacattaaagggagcaaagccggcaatcga
agaactgccaatattaaaagtattggctactcagacctgttctgtctctcaaaagatgac
ctcatggaagctctaactgagtacccagatgccaaaactatgctggaagagaaagggaag
cagattttaatgaaagatggtctactggatctaaacattgcaaatgctggcagtgatcct
aaagatcttgaagagaaggttactcgaatggaggggtcagtagacctcctgcaaacaagg
tttgcccgaatcttggctgagtatgagtccatgcagcagaaactgaaacaaagattaacc
aagattgagaaatttctgaaaccgcttattgacacagaattttcaactattgagggaact
ggagaagaaagtgggcccatcgactctacatag
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