Symphalangus syndactylus (siamang): 129465603
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Entry
129465603 CDS
T10134
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129465603 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssyn03021
]
129465603 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
ssyn03019
]
129465603 (SUPT5H)
Transcription machinery [BR:
ssyn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
129465603 (SUPT5H)
RNA polymerase I system
129465603 (SUPT5H)
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
129465603 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
129465603
NCBI-ProteinID:
XP_055103800
LinkDB
All DBs
Position
17:complement(22605575..22638327)
Genome browser
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaacttttccgaggaggaggacagcgagcgcagcagtgac
ggcgaggaggccgaggtagaggaagagcggcggagtgcagcgggcagtgagaaagaagaa
gagcctgaggaagaagaggaggaggaagaggaggaggaatatgatgaggaagaggaggaa
gaagatgatgaccggcctcccaagaaaccccgccatggaggcttcattctggacgaggct
gatgttgacgatgagtatgaggacgaggaccagtgggaggatggagcagaggacatccta
gagaaagaagagattgaagcctccaatatcgataatgttgtcctggatgaagatcgttct
ggggctcgccgcttgcaaaacctctggagggaccagcgagaagaagaactgggcgagtat
tacatgaagaaatatgccaagtcatctgtgggagagacggtgtatggaggatctgatgag
ctctcagatgacatcacccagcagcagctgctcccaggagtcaaggatcccaatctgtgg
actgtcaaatgtaagattggggaggaacgggccacggcgatttccttgatgcgcaagttc
attgcctaccagttcacagacacgcccctgcagatcaagtcagtagtggcaccagagcat
gtgaagggctacatctacgtggaggcctacaagcagacccacgtgaagcaggccattgag
ggagtgggcaacctgcggcttggttactggaaccagcagatggtgcccatcaaggagatg
acagatgtgctcaaagtagtgaaggaggtggccaacctgaaaccaaagtcttgggtccgc
ctcaaacggggcatctacaaggatgacattgctcaggtggactacgtggagcccagccag
aacaccatctccctgaagatgatcccgcgcatcgactacgatcgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcggcctccacagaggctgttt
gatgctgagaagatcaggtccctggggggtgatgttgcctctgatggtgacttcctcatc
tttgaggggaaccgttacagccggaagggctttctgttcaagagcttcgccatgtctgct
gtgatcacggagggtgtgaagcccacactctctgagctggaaaagtttgaggaccagcca
gagggcatcgacctggaggtggtgactgagagcacagggaaggagcgggagcacaacttc
caacctggggacaacgtggaggtctgtgagggtgagctcatcaacctgcagggcaagatc
ctcagtgtggatggcaacaagatcaccatcatgcccaagcatgaggacctcaaggacatg
ttggagttcccagcccaggaacttcggaaatacttcaagatgggcgaccacgtgaaggtg
attgccggccgatttgagggcgacacaggcctcattgtgcgggtggaggagaatttcgtt
atcctgttctctgacctcaccatgcatgagctgaaggtgctcccccgggacctgcagctc
tgctcagagacagcatcaggtgtggatgttgggggccagcatgaatggggcgagctggtg
cagctggatccccagactgtgggtgtcatcgtgcgactagaacgggagaccttccaggtg
ctgaacatgtacgggaaggtggtgactgtcagacatcaggctgtgaccaggaagaaggac
aaccgctttgctgtggccttggactcagagcagaacaacatccatgtgaaagacatcgtt
aaggtcattgatggcccccactcaggccgagagggggagattcgccatctcttccgaagc
ttcgccttcctacattgcaagaaactggtggagaacgggggcatgtttgtctgcaagact
cgccacctggtgctggctgggggctcaaagccccgtgatgtgaccaacttcaccgtgggt
ggctttgcgcctatgagtccacggatcagcagccccatgcaccccagtgctggaggtcag
cgtggtggctttggtagcccaggtggcggcagtggtggcatgagcaggggccggggccgg
agggacaacgaactcatcggccagaccgtgcgcatctcccaggggccctacaaaggctac
atcggtgtggtgaaggatgccacggagtccacggcccgtgtggagctgcactccacctgc
cagaccatctctgtggaccgtcagcggctcaccacggtgggctcacggcgcccaggtggc
atgacctcgacctatgggcggacgcccatgtatggctcccagacgcccatgtatggctct
ggctcccgaacacctatgtacggctcacagacgcccctccaggatggcagccgcacccca
cactacggctcgcagacacccctgcatgatggcagccgcactcctgcccagagtggggcc
tgggaccccaacaaccccaacacgccgtcacgggctgaggaagaatatgagtatgctttc
gacgatgagcccaccccgtccccgcaggcctatgggggaacccccaatccccaaacacct
ggctacccagacccctcgtccccacaggtcaacccacagtacaacccgcagacgccaggg
acgccggccatgtacaacacagaccagttctctccctatgctgccccctccccacaaggt
tcctaccagcccagccctagcccccagagctaccaccaggtggcgccaagcccagcaggc
taccagaatacccactccccggccagctaccaccctacaccctcgcccatggcctatcag
gctagccccagcccgagtcctgttgggtacagtcctatgacacctggagctccctcccct
ggtggctacaacccacacaccccaggctcaggcatcgagcagaactccagcgactgggtg
accactgacattcaggtgaaggtgcgggacacctacctggatacacaggtggtgggacag
acaggtgtcatccgcagtgtcacggggggcatgtgctccgtgtacctgaaggacagtgag
aaggtcgtcagcatttccagtgagcacctggagcccatcacccccaccaagaacaacaag
gtgaaagtgatcctgggcgaggatcgggaagccacgggcgtcctgctgagcattgatggt
gaggatggcattgtccgtatggaccttgatgagcagctcaagatcctcaacctccgcttc
ctggggaagctcctggaagcctga
DBGET
integrated database retrieval system
