Symphalangus syndactylus (siamang): 129466105
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Entry
129466105 CDS
T10134
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D isoform X2
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyn03019
]
129466105 (MEX3D)
04121 Ubiquitin system [BR:
ssyn04121
]
129466105 (MEX3D)
Enzymes [BR:
ssyn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129466105 (MEX3D)
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129466105 (MEX3D)
Ubiquitin system [BR:
ssyn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129466105 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
KH_DEAH11_2nd
zf-RING_4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
129466105
NCBI-ProteinID:
XP_055105067
LinkDB
All DBs
Position
17:complement(11244795..11258281)
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AA seq
664 aa
AA seq
DB search
MPSSLGQPDGGGGGGGGAGAAGEDPGPGPAPPPEGAQEAAPAPRPPPEPDDAAAALRLAL
DQLSALGLGGAGDTDEEGAAGDGAAAAGGADGGAAPEPVPPDGPEAGAPPTLAPAVAAAP
GSLPLLDPNASPPPPPPPPRPSPPDVFAGFAPHPAALGPPTLLADQMSVIGSRKKSVNMT
ECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREI
LSAAEHFSIIRATRSKAGGLPGTAQGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQ
QRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEIEAHITLRTGAFTDAGPDSDFHANGTD
VCLDLLGAAASLWTKTPNPGRRPPTATAGLRGDTALGAPSAPEAFYAGSRGGPSVPDPGP
ASPYSGSGNGGFAFGGEGPSAPVGTAAPDDCDFGFDFLALDLTVPAAATIWAPFERAAPL
PAFSGCSTVNGAPGPAAAGARRSSGAGTPRHSPTLPEPGGLRLELPLSRRGAPDPVGALS
WRPPQGPVSFPGGAAFSTATSLPSSPAAAACAPLDSGASENSRKPPSASSAPALARECVV
CADGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIRVETETPQPGGASAL
QGQY
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctcggccagcccgacggcggcgggggcggcggcggcggcgcgggggcg
gcgggggaagaccccggacccggacctgcgcccccgcccgagggcgcccaggaggccgcg
cccgcgccccggccgccgcccgaacccgacgacgcggccgccgcgctccgcctggcgctg
gaccagctgtcggcgctcgggctggggggcgctggtgacacggacgaggagggggcggcc
ggggacggcgcagcggcggcggggggcgcggacggcggggcggctccggagcctgtgccc
cccgacggaccggaggccggcgcgcccccgaccctggcccccgccgtggccgcggccccc
gggtcgctgccgctgctggaccccaacgcgagtccgccgcccccgccgccgccgccccgg
ccttcgccccccgacgtgttcgcgggcttcgcgccccaccccgcggccctgggccccccg
acgctgctggccgaccagatgagcgtgatcggcagccgcaagaaaagcgtcaacatgacc
gagtgcgtcccggtgcccagctccgagcacgtcgccgagatcgtgggtcgccagggctgc
aagatcaaggccctgcgggccaagacaaacacctacatcaagaccccggtgcggggcgag
gagccggtcttcatcgtgacgggccggaaggaggacgtggagatggccaagcgtgaaatc
ctgtcggcggccgaacacttctccatcatccgcgccacgcgcagcaaggccggcggtctg
cccggcaccgcccagggcccgcccaacctccccggacagaccaccatccaggtgcgcgtg
ccctaccgggtggtggggctggtagtggggcccaagggcgccaccatcaagcgcatccag
cagcggacgcacacctacatcgtgacgcccgggcgcgacaaggagccggtgttcgcagtc
actgggatgcccgagaacgtggaccgcgcgcgcgaggagatcgaggcgcacatcacgctg
cgcactggcgccttcaccgacgcaggccctgacagcgacttccacgccaacggcaccgac
gtctgcctagacctgctcggggcggccgccagcctctggaccaagacccccaacccggga
cgacggccccccacggccacggccggcctccgcggggacacagccctgggcgcacccagc
gcccccgaggccttctacgcgggcagccgcggcggcccctccgtgccagacccaggcccc
gccagcccctacagcggctccggcaacgggggcttcgccttcggcggggagggtcccagt
gccccggtggggacggccgcccccgacgactgcgacttcggcttcgacttcctggcgctg
gacctgactgtgcccgccgcggccaccatctgggcgcctttcgagcgcgccgcccccttg
cccgccttcagcggctgctccacggtcaacggagccccgggaccagccgccgccggcgcc
cggcgcagcagcggggccgggaccccccgccactcgcccacgctgccggagcccggcggc
ctccgcctggagctcccgctgtcccgccgcggcgccccggacccggtgggcgcgctttcc
tggcgacccccgcagggccccgtatccttcccaggcggcgccgccttctccacggccacc
tcgctgcccagcagccccgcggccgccgcctgcgcccccctggactccggcgcctccgaa
aacagccgcaagcccccttcggcgtcctcggccccggccctggcgcgagagtgcgtggtg
tgcgccgatggcgaggtgatggctgcgctggtcccctgcggccacaacctcttctgcatg
gactgcgccgtccgcatctgcggcaagagcgagcccgagtgtcccgcctgccgcacgccg
gccacccaggccattcgcgtggagacggagaccccgcagcccggcggcgcctcagccctg
caaggacagtattga
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