Symphalangus syndactylus (siamang): 129466497
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Entry
129466497 CDS
T10134
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
129466497 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssyn03000
]
129466497 (CIC)
Transcription factors [BR:
ssyn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129466497 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
129466497
NCBI-ProteinID:
XP_055106072
LinkDB
All DBs
Position
17:complement(20182190..20209520)
Genome browser
AA seq
2517 aa
AA seq
DB search
MKPMKKACTGLSGPGSGSKSPPATRAKALRRRGAGEGDKPEEEDDEAQQPQPQPGPEEAE
EGEEEEAERGPGAEGPPLELHPGDPAPGPAEDPKGDGEAGRWEPSLSRKTATFKSRAPKK
KYVEEHGAGSSGVAGAPEERVRTPEEASGLGVPPRPPTSTRSSSTDTASEHSADLEDEPA
EACGPGPWPPGSTSGSYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGDRAL
TFYEGVPGAGVDVVLDATPPPGALVVGTAVCTCVEPGVAAYREGVVVEVATKPAAYKVRL
SPGPSSQPGPPGSLPQPPQPLHREPEEAVWVARSSLRLLRPPWEPETMLRKPPTGPEEEQ
AEPGATLPPCPAALDPKQPEDAEVSKISFGGNLGTHCEEGEEKHPPALGTPALLPLPPPQ
LLSPPPKSPAFVGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGTAPAARARTPLTAAQQK
YKKGDVVCTPSGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADSGP
GGAGRPAAVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECEAA
VMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAVRS
RHLSASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTELLP
HPGALGAPGAGGGGAAPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQPS
PLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVGTAGEVRAGGPG
RGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAFHP
SPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDP
SVQPSEAQQPASHPVASNQSKEPAESAAVAHERPPGGTGSADPGRPPGATCPESPGPGPP
HPLGVVEPGKGPPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRT
QSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVS
KILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGG
HKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSSSCGAERLHTVGGPGSAR
PRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFAAPGEGGALA
ATGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDLKCKERV
TDSESGDSSGEDPEGNKGFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPPVGFGKGYGSA
PSSSASSPASSSASAATSFSLGSGTFKAQESGQGSTAGPLRPPPPGAGGPATPSKATRFL
PTDPATFRRKRPESVGGLEPPGPSVIAAPPSGGGNILQTLVLPPNKEEQEGGGARVPSTP
APSLAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPSSGRAEASPNDTAGARTEM
GTGSRVPGGSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYG
APAPPAVQFIAQGAPGGGTTAGSGAGAGSGPNGPVPLGILQPGALGKAGGITQVQYILPT
LPQQLQVAPAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQS
VPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPFSV
PVQNGAQPPSKIIQLTPVPVSTPSGLVPPLSPATLPGPTSQPQKVLLPSSTRITYVQSAG
GHALPLGTSPASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQAPLLAPGQVG
VSPVPSPQLPPACAAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVYTVATSTTPPAA
TILPKGPSAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGS
FEAGASGRPGPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWTPTARSSPPLPP
PAEERTSAKGPETMASKFPSSSSDWRVPGQGLENRGEPPTPPSPAPAPAVAPGGSSESSS
GRAAGDTPERKEAAGTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVL
PSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAK
CEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATA
AFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPVPPPTGTAAAPAPTP
SPAGGPDPTSPSSDSGTAQSAPPLPPPPESGPGQPGWEGAPQPSPPPPGPSTAATGR
NT seq
7554 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaggcatgcactggcctttcaggtcctggcagtggcagcaagtcc
cccccagccaccagggccaaggctctgaggcggcgaggggctggggagggtgacaagcca
gaggaggaggacgacgaggcacagcagccgcaaccgcagcccgggcccgaagaggctgag
gaaggagaggaggaggaggctgagcggggccctggggctgaaggtcctccactggagctg
caccctggcgacccggctccaggcccagcagaggaccccaaaggggatggggaggcaggc
cgctgggagccctcactcagccgcaagacagccacgttcaagtctcgagcgcccaagaag
aaatatgtggaggagcacggagctggcagcagtggggtggctggggcccctgaagagcgg
gtgcggacccctgaggaggccagtggcctgggggtgcctccacggccacccacctccact
cgttcctcctccactgacacagccagcgagcactcggcggacctggaggatgagccggct
gaggcttgtggtccaggcccctggccccctggcagcaccagtggcagctatgacctgcgg
cagctgcggtcccagcgggtgctggctcggcgtggtgacggcctcttcctgccggctgtg
gtgcgccaggtgcgccgaagccaagacctgggcgtgcagttccctggtgaccgagccctg
actttctatgagggggtgccaggcgctggtgtggatgtagttttggatgccacaccccca
ccaggtgccctggtggtgggcacagctgtgtgtacctgtgtggagcccggcgtggctgcc
tatcgggaaggcgtggtggtagaggtggccaccaagccagctgcctacaaggtccgtctc
agccctggccccagttcccagccaggcccaccaggcagcctcccgcagcccccacagcca
ctgcaccgtgagccagaggaggccgtgtgggtagcccgctccagcctacgcctgctgcgc
cccccctgggaacctgagaccatgctgaggaagccccctacaggccctgaggaagagcag
gcggagcctggggccaccctgccaccctgccccgctgccctggaccccaaacagcctgag
gacgctgaggtctctaagatcagctttggtggcaacctgggtactcactgtgaggagggc
gaggagaagcaccccccagccctgggtaccccagccctgctcccactgcccccaccccag
ctcctgtcgccgccacccaagtctccagcctttgtgggccctggccgccctggcgagcag
ccctcaccctgccaggaggggagccagggcggcagccgcagcagcagcgtggcctccctg
gaaaaggggacagcaccggcagcccgggcccgcacaccactgacagccgcccaacagaag
tacaagaagggcgatgtggtctgcacacccagcggaatacgaaagaagttcaacggcaag
cagtggcgccggctgtgctcgcgagatggctgcatgaaggagtcacagcggcgaggctac
tgctcacgccacctgtccatgcgaaccaaagagatggagggcctggcagacagtgggccc
gggggggcgggccggcccgcagccgtggcagcccgtgagggcagcacggagtttgactgg
ggtgatgagacgtcgagggacagtgaggccagcagtgtggcggctcgtggagactcacgg
ccacgcctggtggcccctgctgacttgtcacgctttgagttcgacgagtgtgaggcggcc
gtgatgctggtgtcgctgggcagctcgcgatcaggcacaccctccttctcacctgtctcc
actcaatcgcccttctcgccagccccgtcaccctcaccctcgccactcttcggcttccgc
cctgccaacttcagccccatcaatgcctcgccagtcatccagcgcactgcagtccgcagt
cgccacctgagtgccagcacccctaaggcaggtgtgctgacgccaccagacctgggcccc
catccaccgccacctgccccccgagagcgccactcctctggaatcctacccaccttccag
accaacctgaccttcaccgtgcccatcagccctgggcgacggaagacagagctgttgccg
cacccaggggccttgggggcccctggcgcagggggtggaggagccgccccagactttccc
aagagtgacagcttagactctggtgtggactcagtgtcccacacacctacaccctccacg
ccggctggcttccgggctgtgtcccctgctgtgcccttctctcgctcccgccagccctca
ccattgctgctgttgcccccacctgccggcctgacctcggatccagggccctctgtgcgc
agggtgcctgccgtgcagcgggactcacctgttattgtccgcaatcctgatgtgccactg
ccctccaaattccctggcgaggtgggcactgctggtgaggtgcgggctgggggacctggg
cggggctgccgtgagaccccagtgccccctggggtggccagtgggaagcctggcctgccc
ccacctctgccagcccccgtgcccatcaccgtgcctccagctgcaccaactgccgtggcc
cagccgatgcccacctttggcctggcttcttcaccctttcagcctgtggccttccacccc
tcacctgctgccctgttgcccgttttggtgcccagcagctataccagccaccctgccccc
aagaaggaagtcatcatgggccggcctggaacagtgtggacgaatgtggaacctcgctct
gtggctgtgttcccctggcactccttagtccccttcctggcacccagccagcctgacccc
tccgtgcagccgagcgaggcccagcaacctgccagccacccagtggcctccaaccagagc
aaagaacctgctgagtcggcagctgttgctcatgaacggccaccaggtgggacagggagt
gctgaccctgggcggccccctggagccacatgccctgagagcccaggacctggaccccca
caccctttgggggtggtggaacctggtaagggtccgcctcccaccacagaggaggaggcc
cccggccccccaggagagccccggctggacagtgagacagagagtgatcatgatgatgcc
ttcctctccatcatgtctcctgagatccagttgcctctaccgcccggaaaacgtcggacc
cagtccctcagtgccctacccaaggaacgggactcatcttctgagaaggatgggcgcagc
cccaacaagcgggagaaggaccacatccggcggcccatgaatgccttcatgatcttcagc
aagcggcaccgggccctggtccaccagcgtcatcccaaccaggacaaccggaccgtcagc
aagatcctgggcgagtggtggtacgccctggggcccaaggagaagcagaagtaccacgac
ctggccttccaggtgaaggaggcccacttcaaggcccacccagattggaagtggtgcaac
aaggaccgaaagaagtccagctcagaggccaagcccacgagcctggggctggcaggaggg
cacaaggagacgcgggagcggagcatgtcggagacgggcactgctgctgcccctggggtg
tcctctgagctcctgtccgttgcagcccagacactcctgagctcagacaccaaggctccg
gggagcagctcctgtggagcagaacggctacacacagttgggggacctggctcagcccgg
ccccgagctttctcccacagtggggtacacagcctggacggcggagaagtagacagtcag
gcgctacaggaactgacgcagatggtgtctggccctgcatcgtactctggcccaaagcct
tctacccagtatggagctccaggaccctttgcagcccctggtgagggaggtgccttggcg
gccactgggcggccgccgctgctgcccacccgagcttctcgttctcagcgtgcggccagt
gaggacatgacaagtgatgaggagcgcatggtcatctgtgaggaggaaggggatgatgat
gtcattgctgacgatggcttcggcaccaccgacattgatctcaagtgcaaggagcgggtg
accgacagcgagagtggggacagctctggggaggacccagagggcaacaagggctttggt
cggaaggtgttttcacctgtgatccgttcctcctttacccactgccgccccccactggac
cctgagcccccagggcccccggatcctcctgtaggctttggcaaaggctatggttccgcc
ccatcctcctctgcgtcctcgcctgcttcctcctcagcctcggcagccacctccttctca
ctgggctcaggaactttcaaggcccaggagtctggtcagggcagcacagcgggcccccta
cggcccccaccccctggggctgggggtccagcgacaccttccaaggcgacccggttcctc
ccaacggatcctgccaccttccggcgcaagagacctgaaagtgtgggtggcctggagcca
ccaggcccctcggtcatcgcagcccctcccagcggaggaggaaacatcctgcagacactg
gtgctgcctccaaacaaggaggagcaagagggcggcggagccagagtgccctccaccccc
gccccatcactggcctacggggccccagcagctcccctgtcccgtcctgctgccaccatg
gtcaccaacgtggtgcggcctgtcagcagcacacctgtgcccatcgcctctaagcccttc
ccctcctctggccgggctgaggcgtctccaaatgacacagcaggtgccaggactgaaatg
ggcactgggtctcgggtgcctgggggctccccgctgggtgtcagcttagtgtattcggac
aagaagtcggcagcagccacctcaccagccccacacttggtggctggacccctgctgggc
actgtggggaaggcgcctgccactgtcactaacctactggtgggcaccccggggtatggg
gcccctgcaccccctgctgtccagttcatcgcccagggggcccctggcggtgggaccact
gcgggctcaggagcaggtgctgggagtggccccaatgggccagtacccctgggcatcctg
caaccaggtgccctgggcaaggctgggggaatcacccaggtacagtacatcctgcccacg
ctgccccagcagcttcaggtggcacctgccccagcaccagcccctgggaccaaggcagcg
gctcccagcggccctgcacccaccaccagcatccgtttcaccctcccaccgggcacttcc
accaacggcaaagtcctggccgccactgcacccactcctggcatccccatcctgcagtct
gtaccctccgccccaccccccaaagcccagtcagtttctcccgtgcaggccccgcccccg
ggtggctcagcccagctgctacctgggaaggtcttagtgcccctggccgcccctagcatg
tcagtgcggggtggaggggccggccagccgctgccactggtgagcccgcccttctcagta
cctgtgcagaatggtgcccagccccccagcaagatcatccagctgaccccggtgcctgtg
agcacacccagcggcctggtgccacccctgagcccagccacactccctggacccacctcg
cagcctcagaaggtcctgctgccctcctctaccagaatcacctatgtgcagtcagcgggc
gggcacgcgctgcccctgggtaccagccctgcgtccagccaggctggaacagtcacctcg
tacgggcccacgagctctgtagctctaggcttcacctcgctggggcccagcggccccgcc
ttcgtgcagcccctgctctcagcaggccaagccccactgctggctcccggtcaggtgggc
gtgtcgcctgtgcccagtccccagctgccgcctgcctgtgcagcccctggaggtcctgtc
ataacggcgttttactctggcagccctgcacccacctcctcagcacccctggcccagcca
tcccaggcccccccaagcctggtctacactgtggccaccagcacaaccccacctgcagcc
accattctgcccaagggcccgtcagcccctgccacggccaccccagccccgactagccct
ttccccagtgccacagcaggttccatgacctacagcttagtggcccccaaggcccagcgg
cccagcccgaaagccccccagaaagtgaaggcagccatcgccagcattcccgtggggtcc
tttgaggcaggtgcctctgggcggcctggccctgcaccccggcagcctctggagcctggc
ccagtccgagagccaactgccccagagtctgagcttgaggggcagcccacaccaccagcc
cctccacccctgccagagacctggactcccacggcccggagcagccccccactgccccca
cctgctgaggagcggaccagtgccaagggtcctgagaccatggccagcaaattccccagc
tcatcttcagactggcgcgtccctgggcagggcctggagaatcgtggggagcctcccact
cctcccagcccagccccagctccagccgtagcccctggtggcagcagcgagagcagcagt
gggcgggcagccggggacacccccgagcgcaaggaggcggctggtactggcaagaaggtg
aaggtgcggcccccgcccctgaagaagacctttgactctgtggacaacagggtcctgtca
gaagtggacttcgaagagcgctttgctgagctgcctgagtttcggcctgaggaggtgctg
ccctcccccaccctgcagtctctggccacctcaccccgggccatcctgggctcttaccgc
aagaagaggaagaactccacggacctggattcagcacccgaggaccccacctcgcccaag
cgcaagatgagaagacgctccagctgcagctcggaacccaacacccccaagagtgccaag
tgcgagggggacatcttcacctttgaccgtacaggtacagaagccgaggatgtgcttggg
gagctagagtatgagaaggtgccgtactcctccctgcggcgcaccctggaccagcgccgg
gccctggtcatgcagctcttccaggaccatggcttcttcccgtcagcccaggccacagcc
gccttccaggcccgctatgcagacatcttcccctccaaggtttgtctgcagttgaagatc
cgtgaggtgcgccagaagatcatgcaggctgccactcccacagagcagccccccggagct
gaggctcctctccctgtaccgccccccactggcaccgctgctgcccctgcccccactccc
agccccgcgggggggcctgaccccacctcacccagctcggactctggcacggcccagtct
gccccgccactgcctccacccccagagtcggggcctggacagcctggctgggagggggct
ccccagccctcccccccacccccaggtccctccacagctgccacaggcaggtga
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integrated database retrieval system
