Symphalangus syndactylus (siamang): 129466500
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Entry
129466500 CDS
T10134
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129466500 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssyn03021
]
129466500 (TAF5)
03036 Chromosome and associated proteins [BR:
ssyn03036
]
129466500 (TAF5)
Transcription machinery [BR:
ssyn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129466500 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
129466500 (TAF5)
Chromosome and associated proteins [BR:
ssyn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129466500 (TAF5)
STAGA complex
129466500 (TAF5)
TFTC complex
129466500 (TAF5)
SAGA complex
129466500 (TAF5)
SLIK complex
129466500 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
129466500
NCBI-ProteinID:
XP_055106102
LinkDB
All DBs
Position
2:complement(35198591..35220037)
Genome browser
AA seq
798 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGGTTNNGPNGGGGNVAASSSTGGD
GGTPKPTVAVSAAAPAGAAAVPAAAPDASAPHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGSGAPGEVDSAGAEVASALLSRVTASAPAAPDPPGTGASGATVVSGSASGPA
APGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYP
LFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRT
SKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGE
AKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPNAP
PQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDS
SLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGH
SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS
GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV
RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD
GEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVH
LHFTRRNLVLAAGAYSPQ
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggaccg
ccaacgctgctacctccgcaggcgggggacggcgcaggcgagggtagcggcggcactacc
aacaacggccccaacggcggcggcgggaacgttgcggcgtcgtcgtccactggcggggat
ggcgggacccccaagcccacggtggctgtctccgccgctgccccggcgggggcggccgcg
gtgcctgcagctgctccggacgccagcgctccgcacgaccgacagactctactggccgtg
ctgcagttcctacggcagagcaacctccgcgaggccgaagaggcgctgcgccgtgaggcc
cggctgctggaggaggcagtggcgggctccggagccccgggagaggtggacagcgccggc
gctgaggtggccagcgcgcttctcagccgggtgaccgcctcagcccctgcggcccccgac
cctccgggcactggcgcttcgggggccacggtcgtctcaggttcagcctcaggtcctgcg
gctccgggtaaagttggaagtgttgctgtggaagaccagccagatgtcagtgccgtgttg
tcggcctacaaccaacaaggagatcccacaatgtatgaagaatactatagtggactgaaa
cacttcattgaatgttccctggactgccatcgggcagaattatcccaactcttttatcct
ctgtttgtgcacatgtacttggagctagtctacaatcaacatgagaatgaagcaaagtca
ttctttgagaagttccatggagatcaggaatgttattaccaggatgacctacgagtatta
tctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggattttcgaaca
agtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagaggcatcttcag
gagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgacatcttt
gatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttggcaggagag
gctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagaaccagaaatt
gaggtacctttggatgatgaggatgaagagggagaaaatgaagaaggaaaacctaaaaag
aagaagcctaaaaaagatagtattggatccaaaagcaaaaaacaagatcccaatgctcca
cctcagaatagaatccctcttcctgagttgaaagattcagataaattggataagataatg
aatatgaaagaaaccaccaaacgagtacgccttgggccagactgcttaccctccatttgt
ttctatacatttcttaatgcttaccagggtcttactgcagtggatgtcactgatgattct
agtctgattgctggaggttttgcagattcaactgtcagagtgtggtctgtaacacccaaa
aagcttcgtagtgtcaaacaagcatcagatcttagtctcatagacaaagaatcagatgat
gtcttagaaagaatcatggatgagaaaacagcaagtgagttgaagattttgtatggtcac
agtgggcctgtctatggagccagcttcagtccggataggaactatctgctttcgtcttca
gaggacggaactgttagattgtggagccttcaaacatttacttgtttggtgggatataaa
ggacacaactatccagtgtgggacacacaattttctccatatggatattattttgtgtca
gggggccatgaccgagtagctcggctctgggctacagaccactatcagcctttaagaata
tttgccggccatcttgctgatgtgaattgtaccagattccatccaaattctaattatgtt
gctacgggctctgcagacagaactgtgcggctctgggacgtcctgaatggtaactgtgta
aggatcttcactggacacaagggaccaattcattccttgacattttctcccaatgggaga
ttcctggctacaggagcaacagatggcagagtgcttctttgggatattggacatggtttg
atggttggagaattaaaaggccacactgatacagtctgttcacttaggtttagtagagat
ggtgaaattttggcatcaggttcaatggataatacagttcgattatgggatgctatcaaa
gcctttgaagatttagagaccgatgactttactacagccactgggcatataaatttacct
gagaattcacaggagttattgttgggaacgtatatgaccaaatcaacaccagttgtacac
cttcattttactcgaagaaacctggttctagctgcaggagcttatagtccacaataa
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integrated database retrieval system
