Symphalangus syndactylus (siamang): 129466909
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Entry
129466909 CDS
T10134
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X3
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04120
Ubiquitin mediated proteolysis
ssyn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129466909 (SYVN1)
04120 Ubiquitin mediated proteolysis
129466909 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssyn04121
]
129466909 (SYVN1)
Enzymes [BR:
ssyn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129466909 (SYVN1)
Ubiquitin system [BR:
ssyn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129466909 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-HC5HC2H
zf-ANAPC11
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
129466909
NCBI-ProteinID:
XP_055107224
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Position
1:complement(93903507..93910771)
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AA seq
617 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVI
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAAALSRPSGA
ATTTAAGTSAAAASATASGPGSGSAPEAGPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAG
FAGLTPEELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSV
SSTEETATTVVAAASSTSVPSSEATTPTPGASPPAPETERPPAPESVGTEEMPEDGEPDA
AELRRRRLQKLESPVAH
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcacggcagtgatgatggcggccagcctggcgctgaccggggctgtggtggct
cacgcttactacctcaaacaccagttctaccccactgtggtgtacctgaccaagtccagc
cccagcatggcagtcctgtatatccaggcctttgtccttgtcttccttctgggcaaggtg
atgggcaaggtgttctttgggcaactgagggcagcagagatggagcaccttctggaacgt
tcctggtacgccgtcacagagacttgtctggccttcaccgtttttcgggatgacttcagc
ccccgctttgttgcactcttcactcttcttctcttcctcaaatgcttccactggctggct
gaggaccgtgtggactttatggaacgcagccccaacatctcctggctctttcactgccgc
attgtctctcttatgttcctcctgggcatcctggacttcctcttcgtcagccacgcctat
cacagcatcctgacccgtggggcttctgtgcagctggtgtttggctttgagtatgccatc
ctgatgacgatggtgctcaccatcttcatcaagtatgtcctgcactccgtggacctccag
agtgagaacccctgggacaacaaggctgtgtacatgctctacacagagctgtttacaggc
ttcatcaaggttctgctgtacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccactctttgccatccggcccatgtacctggccatgagacagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagccatccgcaacatgaacaccctgtatccagatgccacc
ccagaggagctccaggcaatggacaatgtctgcatcatctgccgagaagagatggtgatt
ggtgccaagagactaccctgcaaccacattttccataccagctgcctgcgctcctggttc
cagcggcagcagacctgccccacctgccgtatggatgtccttcgtgcatcgctgccagcc
cagtcaccaccacccccggagcctgcggatcaggggccaccccctgcccctcacccccca
ccactcttgcctcagccccccaacttcccccagggcctcctgcctccttttcctccaggc
atgttcccactgtggcctcccatgggcccctttccacctgtcccgcctccccccagctca
ggagaggctgtggcccctccatccaccagtgcagcagccctttctcggcccagtggagca
gctacaaccacagctgctggcaccagtgctgctgctgcttctgccacagcatctggccca
ggctctggctctgccccagaggctggccctgcccctggttttcccttccctcctccctgg
atgggtatgcccctgcctccgccctttgccttccccccaatgcccgtgccccctgcgggc
tttgctgggctgacgccagaggagctacgagctctggagggccatgagcggcagcacctg
gaggcccggctgcagagcctgcgtaacatccacacactgctggacgccgccatgctgcag
atcaaccagtacctcaccgtgctggcctccttggggcccccccggcctgccacttcagtc
agctccactgaggagactgccactacagttgttgctgctgcctcctccaccagcgtccct
agctcagaggccacgaccccaaccccaggagcctccccaccagcccctgaaacggaaagg
cctccagcccctgagtcagtgggcacagaggagatgcccgaggatggagagcctgacgca
gcagagctccgccggcgccgcctgcagaagctggagtctcctgttgcccactga
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