Symphalangus syndactylus (siamang): 129467243
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Entry
129467243 CDS
T10134
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03410
Base excision repair
ssyn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129467243 (POLL)
03450 Non-homologous end-joining
129467243 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssyn03400
]
129467243 (POLL)
Enzymes [BR:
ssyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129467243 (POLL)
DNA repair and recombination proteins [BR:
ssyn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
129467243 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
129467243 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
NTP_transf_2
BRCT_2
HHH
Motif
Other DBs
NCBI-GeneID:
129467243
NCBI-ProteinID:
XP_055107475
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All DBs
Position
2:37056800..37066197
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AA seq
581 aa
AA seq
DB search
MDPRGILKAFPKRKKIHADASSKVLEKIPRREEGEAEEWLSSLRAHVVRTGIGRARAELF
EKQIVQHGGQLCPAQGPGVTHIVVDEGMDYERALRLLRLPRLPPGAQLVKSAWLSLCLQE
RRLVDVAGFSIFIPSRYLDQPQPSKAEQHASIPPGTHEALLQTALSPPPSSTRPVSPPQK
AKEAANTQAQPISDDEASDGEETQVSAADLEALISGHYPTSLEGDCEPSPASAVLDKWVC
AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACS
IPGIGKRMAEKIIEILESGHLRKLDHISDSVPVLELFSNIWGAGTKTAQMWYQQGFRSLE
DIRSQASLTTQQAIGLKHYSDFLERIPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRG
KATCGDVDVLITHPDGRSHRGIFSRLLDSLRQQAVPSVGPGFLTDDLVSQEENGQQQKYL
GVCRLPGPGWRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALST
AVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaggggtatcttgaaggcatttcccaagcggaaaaaaattcatgctgatgcg
tcatcaaaagtacttgaaaagattcccaggagggaagagggagaagcagaagagtggctg
agctcccttcgggcccatgttgtgcgcactggcattggacgagcccgggcagaactcttt
gagaagcagattgttcagcatggtggccagctatgccctgcccagggcccaggtgtcact
cacattgtggtggatgaaggcatggactatgagcgggccctccgccttctcagactaccc
cggctgcccccgggtgctcagctggtgaagtcagcctggctgagcttgtgccttcaggag
aggaggctggtggatgtagctggattcagcatcttcatccccagtaggtacttggaccag
ccacagcccagcaaggcagagcagcatgcttctattcctcctggcacccatgaggccctg
cttcagacagccctttctcctcctccttcttccaccaggcctgtgtctcctccccaaaag
gcaaaagaggcagcaaacacccaagcccagcccatctctgatgatgaagccagtgatggg
gaagaaacccaggttagcgcagctgatctggaagccctcatcagtggccactaccccacc
tcccttgagggagattgtgagcctagcccagcctctgcggtcctggataagtgggtctgt
gcacagccctcaagccagaaggcaaccaaccacaacctccatatcacagagaagctggaa
gttctggccaaagcctacagtgttcagggagacaagtggagggccctgggctatgccaag
gccatcaatgccctcaagagcttccataagcctgtcacctcgtaccaggaggcctgcagt
atccctgggattgggaagcggatggctgagaaaatcatagagatcctggagagcgggcat
ctgcggaagctggaccacatcagtgacagcgtgcctgtcttggagctcttctccaacatc
tggggagctgggaccaagactgcccagatgtggtaccaacagggcttccgaagtctggaa
gacatccgcagccaggcctccctgacaacccagcaggccatcggcctgaagcattacagt
gacttcctggaacgtatacccagggaggaggctacagagattgagcagacagtccagaaa
gcagcccaggcctttaactccgggctgctgtgtgtggcatgtggttcataccgacgggga
aaggcgacctgtggtgatgtcgacgtgctcatcactcacccagatggccggtcccatcgg
ggtatcttcagccgcctccttgacagtcttcggcagcaagcagtcccctctgttgggcca
gggttcctcacagatgacttggtgagccaagaggagaatggtcagcaacagaagtacttg
ggggtgtgccggctcccagggccagggtggcggcaccggcgcctggacatcatcgtggtg
ccctacagcgagtttgcctgtgccctgctctacttcaccggctctgcacacttcaaccgc
tccatgcgcgccctggccaagaccaagggcatgagtctgtcagaacatgccctcagcact
gctgtggtccggaacacccatggctgcaaggtggggcctggccgagtgctgcccactccc
actgagaaggatgtcttcaggctcttaggcctcccctaccgagaacctgctgagcgggac
tggtga
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