Symphalangus syndactylus (siamang): 129467266
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Entry
129467266 CDS
T10134
Symbol
DEPDC5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
129467266 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129467266 (DEPDC5)
Membrane trafficking [BR:
ssyn04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
129467266 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
FGGY_N
Motif
Other DBs
NCBI-GeneID:
129467266
NCBI-ProteinID:
XP_055107545
LinkDB
All DBs
Position
18:complement(66623333..66802321)
Genome browser
AA seq
1602 aa
AA seq
DB search
MRTTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSVDEFPEINRA
SILQDHKGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPQGDNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRSAPRDSRLGDDYNIPHWINHSFYTSKSQLFCNSFT
PRIKLAGKKPASEKAKNGRDTSLGSPKESENALPIQVDYDAYDAQVFRLPGPSRAQCLAT
CRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQASDDSSLGKSANILMIPHPHL
HQYEVSSSLGYTSTRDVLENMMEPPQRDSSAPGRFHVGSAESMLHVRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSGQRDPTHSSAELLE
LAYHEAAGRHSNSRQPGDGMSFLNFSGTEELSVGLLSNSGAGMNPRTQNKDSLEDSVSTS
PDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPE
ADIDRRDEDGVQMTAQQVFEEFICQRLMQGYQIIVQPKAQKPNPAVPPPLSSSPLYSRGL
VSRNRLEEEDQYWLSMGRTFHKVTLKDKMITVTRYLPKYPYESAQIHYTYSLCPSHSDSE
FVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACVTATKRIT
EGEAHCDIYGDRPRADEDEWQLLDGFIRFVEGLNRIRRRHRSDRMMRKGTAMKGLQMTGP
ISTHSLESTAPPVGKKGTSALSALLEMEASQKCLGEQQAAVHGGKSSAQSAESSSVAMTP
TYMDSPRKDGAFFMEFVRSPRTASSAFYPQVSVDQTATPMLDGTSLGICTGQSVDRGNSQ
TFGNSQNIEQGYSSTNSSDSSSQQLVASSLTSSSTLTEILEAMKHPSTGVQLLSEQKGLS
PYCFISAEVVHWLVNHVEGIQTQAMAIDIMQKMLEEQLITHASGEAWRTFIYGFYFYKIV
TDKDPDRVAMQQPATTWHTAGVDDFASFQRKWFEVAFVAEELVHSEIPAFLLPWLPSRPA
SYASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLN
AAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFI
PLNINCLLKEGSEHLFDSFEPETYWDRMHLFQEAIAHRFGFVQDKYSASAFNFPAENKPQ
YIHVTGTVFLQLPYSKRKFSGQQRRRRNSTSSTNQNMFCEERVGYNWAYNTMLTKTWRSS
ATGDEKFADRLLKDFTDFCINRDNRLVTFWTSCLEKMHASAP
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaacaaaggtctacaaactcgtcatccacaagaagggctttgggggcagtgat
gatgagctagttgtgaaccccaaagtgttccctcacatcaagcttggagacattgtagag
attgcacaccccaacgatgaatacagccctctgcttttgcaggtcaaatcacttaaggaa
gatttacagaaggaaactatcagtgtggaccagactgtgactcaagtgttccggctgaga
ccttatcaggatgtctatgttaatgtcgtagaccctaaggatgtgacccttgacctagtg
gaattaacttttaaggatcagtatattggccgtggggatatgtggcgactaaagaaaagt
ttggtcagcacatgtgcctatatcacccagaaggtggagtttgctggcatcagagcacag
gctggtgagctgtgggttaagaatgagaaggtcatgtgtggttacatcagtgaagatacc
agggtggtgtttcgttctacgtcggctatggtttacatatttattcagatgagctgtgaa
atgtgggattttgatatttatggggatttgtattttgagaaagctgtgaatggtttcctt
gctgatctatttaccaagtggaaggagaagaactgtagtcatgaagtgacagtggtcctg
ttttctagaactttctatgatgcaaaatctgttgatgaatttcctgaaataaaccgagcc
tcaattctacaggatcacaaggggagattctatgaagacttttacaaagtggtggtgcag
aatgagagaagagaagaatggacttcacttctcgtaaccattaaaaaactcttcatccag
tatccagtgttggtgcgactggaacaggcagagggctttcctcaaggagacaattctacc
tcagcacaaggaaactacctggaggccatcaatctgtcattcaatgtgtttgataagcac
tacatcaaccgcaactttgaccgaactgggcagatgtcagtggtgatcacgcccggggtg
ggtgtctttgaagtggaccgcctactcatgatcctgaccaagcagcggatgatagataat
ggaattggtgtggacttggtgtgcatgggagagcaaccgttacatgctgtcccattgttc
aagctccataatcggagtgctccccgggattctcgtctgggcgatgactataatatccct
cactggataaaccacagtttctacacatccaaaagccagctcttttgtaatagtttcacc
ccacgaataaaactggcaggaaagaagcctgcctctgagaaagcaaaaaatggccgtgat
acatctctcgggagtccaaaagaatctgagaacgcccttcccatccaagtagattatgac
gcctatgacgctcaagtgttcaggctacccggcccgtcccgggcccagtgcctcgccacc
tgcaggtctgtgcgagagcgagaaagtcacagtcgaaaaagtgccagctcctgtgatgtt
tcatccagcccttccctaccaagccgcacactgcccactgaggaagtgaggagccaggct
tctgacgacagctccctaggcaagagcgccaacatcctgatgatcccacacccccacctg
caccagtatgaagtcagcagctccttgggttacaccagcactcgagatgtcctggagaac
atgatggagccaccacagcgagactccagtgcaccagggaggtttcatgttggcagcgca
gaatccatgctgcatgttcgacctggtggatacacgccccagagagcactgattaacccc
ttcgctccctctcggatgcccatgaagcttacgtccaacagaaggcgctggatgcacact
tttcctgtgggaccatccggagaagccatccagatccaccaccagacccgacagaatatg
gcggagctgcaaggcagcgggcagagggacccaactcactcctctgcagagctgctggag
ttagcatatcatgaagctgctggaaggcacagcaattcccgccagcctggtgacggcatg
tccttcttgaacttcagtggaacagaagagctttctgtcggcctgcttagcaacagtggt
gcaggtatgaatcctaggacccaaaataaggattccctagaggacagtgtttctacctct
ccagacccaattctgacactgtctgctccccctgtagtgccaggcttctgttgcacagtt
ggagtggactggaagtctctcactactccggcgtgcctccccctcaccaccgactacttc
cctgaccgccagggcctgcagaatgactacacagagggctgttatgatctccttccagaa
gcagacatcgacaggagggacgaagatggtgtgcagatgacagcccagcaggtgtttgaa
gagtttatttgccaacgtctcatgcagggctaccaaatcatagtgcagcccaaggcacag
aaacccaatcctgccgtcccacccccgctgagcagtagcccactctatagccgaggcctt
gtgtcccgaaaccgcctcgaggaggaggaccagtattggctgagtatgggcagaacgttc
cacaaagtgacgctgaaggataagatgatcacagtgacacgataccttcccaagtatcct
tatgaatctgcccagatccactacacctacagcctctgtccttcccactcagactcagag
ttcgtctcctgctgggtggaattctcccacgaacggctggaggagtacaagtggaattac
ttagatcagtatatctgttctgccggctctgaagacttcagcttaattgagtccctgaag
ttctggaggacccgcttcctgctgctgccagcctgtgtcaccgccaccaagcgcatcacg
gagggggaggcccactgcgacatctatggagacaggccccgtgcagacgaggacgagtgg
caactcctggatggttttatccgctttgtggagggcttgaatcgcattcgcaggcggcat
cgctcggatcgcatgatgcggaaagggaccgccatgaaaggcttgcagatgaccgggccc
atttccacgcattctctggagtcaactgcacccccggtggggaagaagggaacctcagct
ctctctgcccttttggagatggaggccagtcagaagtgcctgggagaacagcaggcagct
gtgcatggtgggaagagctccgcccagtcagccgagagcagcagcgttgccatgactccc
acctacatggacagcccacgaaaggacggggccttctttatggagtttgtccgcagccca
cgcacagcatcgtccgccttctaccctcaggtatctgtggaccaaacagccactcctatg
ttggacggcaccagtttgggcatatgcacaggccaatccgtggacagaggcaacagccag
acctttgggaactcccagaacatagaacagggctactcctccacaaactccagtgacagc
agctctcagcagctggtggcaagctccttgacctcatcctccaccctgacagagatcctg
gaagccatgaagcacccctcgacaggagtccagctgctctctgaacagaagggcctctca
ccgtactgcttcatcagcgcggaggtggtgcactggctggtgaaccatgtggaggggatc
cagacacaggcgatggccatcgacatcatgcagaaaatgctggaagagcagctcatcaca
cacgcatctggcgaagcctggcggaccttcatctacggcttctatttctacaagatagta
acggacaaagatcccgaccgagtggccatgcagcaacccgccaccacctggcacacagca
ggagtggacgacttcgccagcttccagcgcaagtggtttgaggtggcctttgtggcagaa
gagctcgtgcactctgagattcctgcctttctcctgccctggctgcccagccggccagcc
tcctatgcaagtaggcacagctcctttagccgaagttttggaggacggagccaggcagcg
gcacttttagctgccactgtcccagagcagaggactgtgaccctggatgttgacgtgaac
aaccgcacagaccggctggagtggtgcagctgttattaccatggcaacttttctctgaat
gcagcctttgagatcaagctgcactggatggcagtgaccgcagcagtactctttgagatg
gtccaaggttggcatcggaaagccacctcctgtggcttcttgttggttccagttttggag
gggccttttgcactgcccagttacctgtatggcgacccccttcgtgcccagctcttcatc
ccactcaacatcaactgcttgctcaaggagggcagcgagcacctttttgatagctttgaa
ccggaaacgtactgggatcgaatgcacctcttccaggaagccattgcacacaggtttggg
tttgtacaagataaatattctgcctctgcttttaacttccctgctgagaacaagcctcag
tatatccacgttacaggaacagtgtttctgcagctgccctactccaagcgcaagttctca
gggcagcagcggcggcggcggaactccaccagctccaccaaccagaacatgttctgcgag
gagcgggtcggctacaactgggcttacaacaccatgctcaccaaaacatggcgctccagc
gccacaggggatgaaaagtttgctgatcggctgctgaaggacttcacggacttctgcatc
aaccgtgacaaccggctggtcacgttctggacaagttgcctggagaagatgcatgccagt
gccccgtga
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integrated database retrieval system
