KEGG   Symphalangus syndactylus (siamang): 129467390
Entry
129467390         CDS       T10134                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1 isoform X2
  KO
K12825  splicing factor 3A subunit 1
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129467390 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssyn03041]
    129467390 (SF3A1)
Spliceosome [BR:ssyn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    129467390 (SF3A1)
 Complex B
    129467390 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    129467390 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 129467390
NCBI-ProteinID: XP_055107891
LinkDB
Position
18:68167102..68189392
AA seq 793 aa
MPAGPVQAVPPPPPVATEPKQPTEEEASSKEDSAPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFSKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDDKQEKAEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPTSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAV
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggccggacccgtgcaggcggtgcccccgccgccgcccgtggccaccgagcccaaa
cagcccacagaagaagaagcatcttcaaaggaggattctgcaccttctaagccagttgtg
gggattatttaccctcctccagaggtcagaaatattgttgacaagactgccagctttgta
gccagaaacgggcctgaatttgaagctaggatccgacagaacgagatcaacaaccccaag
ttcaactttcttaaccccaatgacccttaccatgcctactaccgccacaaggtcagcgag
ttcaaggaggggaaggctcaggagccgtccgccgccatccccaaggtcatgcagcagcag
cagcaggccacccagcagcagctgccccagaaggtccaagcccaagtaatccaagagacc
atcgtgcccaaagagcctcctcctgagtttgagttcattgctgatcctccctccatctca
gccttcgacctggatgtggtgaagctgacggctcagtttgtggccaggaatgggcgccag
tttctgacccagctgatgcagaaagagcagcgcaactaccagtttgactttctccgccca
cagcacagcctcttcaactacttcacgaagctagtggaacagtacaccaagatcttgatt
ccacccaaaggtttgttttcaaagctcaagaaagaggctgaaaacccccgagaagttttg
gatcaggtgtgttaccgagtggaatgggccaaattccaggaacgtgagagaaagaaggaa
gaagaggagaaggagaaggagcgggtggcctatgctcagatcgactggcatgattttgtg
gtggtggaaacagtggacttccaacctaatgagcaagggaacttccctcccccgaccacg
ccagaggagctgggggcccgaatcctcattcaggagcgctatgagaagtttggggagagt
gaggaagttgagatggaggtcgagtctgatgaggaggatgacaaacaggagaaggcggag
gagcctccttcccagctggaccaggacacccaagtacaagacatggatgagggttcagat
gatgaagaagaagggcagaaagtgcccccacccccagagacgcccatgcctccacctctg
cccccaactccagaccaagtcattgtgcgcaaggactatgatcccaaagcctccaagccc
ttgcctccagcccctgctccagatgagtatcttgtgtcccccattactggggagaagatc
cctgccagcaaaatgcaggaacacatgcgcattggacttcttgaccctcgctggctggag
cagcgggatcgctccatccgtgagaagcagagcgatgatgaggtgtacgcaccaggtctg
gatattgagagcagcttgaagcagttggctgagcggcgtactgacatcttcggtgtagag
gaaacagccattggtaagaagatcggtgaggaggagatccagaagccagaggaaaaggtg
acctgggatggccactcaggcagcatggcccggacccagcaggctgcccaggccaacatc
accctccaggagcagattgaggccattcacaaggccaaaggcctggtgccagaggatgac
actaaagagaagattggccccagcaagcccaatgaaatccctcaacagccaccgccacca
tcttcagccaccaacatccccagctcagccccacccatcacttcagtgccccgaccaccc
acaatgccacctccagttcgtactacagttgtctccgcagtacccgtcatgccccggccc
ccaatggcatctgtggtccgactgcccccaggctcagtgatcgcccccatgccgcccatc
atccatgcgcccagaatcaacgtggtgcccatgcctccctcggcccctcctatcatggcc
ccccgcccaccccccatgattgtgccaacagcctttgtgcctgctccacctgtggcacct
gtcccagctccagccccaatgccccctgttcatcccccacctcccatggaagatgagccc
acctccaaaaaactgaagacagaggacagcctcatgccagaggaggagttcctgcgcaga
aacaagggtccagtgtccatcaaagtccaggtgcccaacatgcaggataagacggaatgg
aaactgaatgggcaggtgctggtcttcaccctcccactcacggaccaggtctctgtcatt
aaggtgaagattcatgaagccacaggcatgcctgcggggaaacagaagctacagtatgag
ggtatcttcatcaaagattccaactcactggcttactacaacatggccaatggcgcagtc
atccacctggccctcaaggagagaggcgggaggaagaagtag

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