Symphalangus syndactylus (siamang): 129468077
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Entry
129468077 CDS
T10134
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04512
ECM-receptor interaction
ssyn04514
Cell adhesion molecule (CAM) interaction
ssyn04820
Cytoskeleton in muscle cells
ssyn05144
Malaria
ssyn05205
Proteoglycans in cancer
ssyn05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129468077 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
129468077 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129468077 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
129468077 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
129468077 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
129468077 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129468077 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ssyn04090
]
129468077 (SDC1)
00535 Proteoglycans [BR:
ssyn00535
]
129468077 (SDC1)
Membrane trafficking [BR:
ssyn04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
129468077 (SDC1)
CD molecules [BR:
ssyn04090
]
Proteins
129468077 (SDC1)
Proteoglycans [BR:
ssyn00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
129468077 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Romo1
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
129468077
NCBI-ProteinID:
XP_055109125
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All DBs
Position
18:92056207..92080911
Genome browser
AA seq
310 aa
AA seq
DB search
MRRAALWLGLCALALSLQPALPQIVATNLPPEDQDGSGDDSDNFSGSGAGALQDITLSQQ
TPSTWKDMWLLTATPTSPEPTGLEATAASTSILPAGEGPKEGEAVVLLEVEPGLTAQEQE
ATPQPRETTQLPTTHQASTARATTAQEPTTSHPHRDMQPGHHETSAPTGPSQADLHTPHT
EDGGPSATERAAEDGASSQLPAAEGSGEQDFTFETSGENTAVVAVEPDHRNQSPVDQGAT
GASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQ
KPTKQEEFYA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgcggcgctctggctcgggctgtgcgcgctggcgctgagcctgcagccggcc
ctgccgcaaattgtggctactaatttgccccctgaagatcaagatggctctggggatgac
tctgacaacttctccggctcaggtgcaggtgctttgcaagatatcaccttgtcacagcag
accccctccacttggaaggacatgtggctcctgacggctactcccacgtctccggaaccc
accggcctggaggctacagctgcctccacctccatcctgccagctggagaggggcccaag
gagggagaggctgtagtcctgctagaagtggagcctggcctcactgcccaggagcaggag
gccaccccccaacccagggagaccacacagctcccgaccactcatcaggcctcaacggcc
agagccaccacggcccaggagcctaccacctcccacccccacagggacatgcagcctggc
caccatgagacctcagcccctacaggacccagccaagctgaccttcacactccccacaca
gaggatggaggtccttctgccaccgagagggctgctgaggatggagcctccagtcagctc
ccggcagcagagggctcgggggagcaggacttcacctttgaaacctccggggagaacacg
gctgtagtggccgtggagcctgaccaccggaaccagtccccagtggatcagggggccacg
ggggcctcacagggcctcctggacaggaaggaggtgctgggaggggtcattgccggaggc
ctcgtggggctcatctttgctgtgtgcctggtgggtttcatgctgtaccgcatgaagaag
aaggacgaaggcagctactccttggaggagccgaaacaagccaatggcggggcctaccag
aagcccaccaaacaggaggaattctacgcctga
DBGET
integrated database retrieval system