KEGG   Symphalangus syndactylus (siamang): 129468077
Entry
129468077         CDS       T10134                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn04512  ECM-receptor interaction
ssyn04514  Cell adhesion molecule (CAM) interaction
ssyn04820  Cytoskeleton in muscle cells
ssyn05144  Malaria
ssyn05205  Proteoglycans in cancer
ssyn05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129468077 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    129468077 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129468077 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    129468077 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    129468077 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    129468077 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssyn04131]
    129468077 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:ssyn04090]
    129468077 (SDC1)
   00535 Proteoglycans [BR:ssyn00535]
    129468077 (SDC1)
Membrane trafficking [BR:ssyn04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    129468077 (SDC1)
CD molecules [BR:ssyn04090]
 Proteins
  129468077 (SDC1)
Proteoglycans [BR:ssyn00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   129468077 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1 Glycophorin_A
Other DBs
NCBI-GeneID: 129468077
NCBI-ProteinID: XP_055109125
LinkDB
Position
18:92056207..92080911
AA seq 310 aa
MRRAALWLGLCALALSLQPALPQIVATNLPPEDQDGSGDDSDNFSGSGAGALQDITLSQQ
TPSTWKDMWLLTATPTSPEPTGLEATAASTSILPAGEGPKEGEAVVLLEVEPGLTAQEQE
ATPQPRETTQLPTTHQASTARATTAQEPTTSHPHRDMQPGHHETSAPTGPSQADLHTPHT
EDGGPSATERAAEDGASSQLPAAEGSGEQDFTFETSGENTAVVAVEPDHRNQSPVDQGAT
GASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQ
KPTKQEEFYA
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaggcgcgcggcgctctggctcgggctgtgcgcgctggcgctgagcctgcagccggcc
ctgccgcaaattgtggctactaatttgccccctgaagatcaagatggctctggggatgac
tctgacaacttctccggctcaggtgcaggtgctttgcaagatatcaccttgtcacagcag
accccctccacttggaaggacatgtggctcctgacggctactcccacgtctccggaaccc
accggcctggaggctacagctgcctccacctccatcctgccagctggagaggggcccaag
gagggagaggctgtagtcctgctagaagtggagcctggcctcactgcccaggagcaggag
gccaccccccaacccagggagaccacacagctcccgaccactcatcaggcctcaacggcc
agagccaccacggcccaggagcctaccacctcccacccccacagggacatgcagcctggc
caccatgagacctcagcccctacaggacccagccaagctgaccttcacactccccacaca
gaggatggaggtccttctgccaccgagagggctgctgaggatggagcctccagtcagctc
ccggcagcagagggctcgggggagcaggacttcacctttgaaacctccggggagaacacg
gctgtagtggccgtggagcctgaccaccggaaccagtccccagtggatcagggggccacg
ggggcctcacagggcctcctggacaggaaggaggtgctgggaggggtcattgccggaggc
ctcgtggggctcatctttgctgtgtgcctggtgggtttcatgctgtaccgcatgaagaag
aaggacgaaggcagctactccttggaggagccgaaacaagccaatggcggggcctaccag
aagcccaccaaacaggaggaattctacgcctga

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