Symphalangus syndactylus (siamang): 129469001
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Entry
129469001 CDS
T10134
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A isoform X2
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyn03019
]
129469001 (ZC3H12A)
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
129469001 (ZC3H12A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
129469001
NCBI-ProteinID:
XP_055111062
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All DBs
Position
19:complement(140116628..140126446)
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AA seq
599 aa
AA seq
DB search
MSGPCGEKPVLEASPTMSLWEFEDSHSRQGTPRLAQEPVAEEASAVELQMKVDFFRKLGY
SSTEIHSVLQKLGVQADTNTVLGELVKHGTATERERQASPDSCPQLPLVPRGGGTPKAPN
LEPPLPEEDKEGSDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNWFLERGHTDITVFVP
SWRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAYESDGIV
VSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLTLE
HRKQPCPYGRKCTYGIKCRFFHPERPSCPQRSVADELRANALLSPPRAPSKDKSGQRPSP
SSQSSSLLTESEQCSLDGKKLGAQASPGPHQEGLTQAYAPSGRSLAPSGGSGSSFGPTDW
LPQTLDSLPYVSQDRLDSGIGSLESQMSELWGVRGGGPGEPGPPRAPYTGYSPYGSELPA
TAAFSAFGRAMGAGHFSVPADYPPPPPAFPPREYWSEPYPLPPPTPVLQEPPVQSPGAGR
SPWGRAGRLAKEQASVYTKLCGVFPPHLVEAVMGRFPQLLDPQQLAAEILSYKSQHPSE
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcccctgtggagagaagcctgtcctggaagccagccccaccatgagtctgtgg
gaatttgaggacagccacagccgtcagggcacccccaggctggctcaagagccggtcgct
gaggaggcctcggctgtggaactgcagatgaaggtggactttttccggaagctgggctat
tcatccacggagatccacagcgtcctgcagaagctgggcgtccaggcagacaccaacacg
gtgctgggcgagctggtgaaacacgggacagccaccgagcgggagcgccaggcctcaccg
gactcctgccctcagctccctctagtcccgcggggtggtggcacccctaaggctcccaac
ctggagcctccactcccagaagaggacaaggagggcagcgacctgagaccagtggtcatc
gatgggagcaacgtggccatgagccatgggaacaaggaggtcttctcctgccggggcatc
ctgctggcggtgaactggtttctggagcggggccacacagacatcacagtgtttgtgcca
tcctggaggaaggagcagcctcggcccgatgtgcccatcacagaccagcacatcctgcgg
gaactggagaagaagaagatcctggtattcacaccatcgcgacgcgtgggtggcaagcgg
gtggtgtgctatgacgacagattcattgtgaagctggcctacgagtctgacgggatcgtg
gtttccaacgacacataccgcgacctccaaggcgagcggcaggagtggaagcgcttcatc
gaggagcggctgctcatgtactccttcgtcaatgacaagtttatgccccctgatgaccca
ctgggccggcacgggcccagcctggacaacttcctgcgtaagaagccactcactttggag
cacaggaagcagccgtgtccctatgggaggaaatgcacctatgggatcaagtgccgattc
ttccacccagagcggccgagctgcccccagcgctctgtggcagatgagctccgcgccaat
gctctcctctcaccccccagggccccaagcaaggacaaaagtggccagcggccttcacct
tcatcccagtccagctctctgctaacagagagtgagcaatgcagcctggatgggaagaag
ctgggggcccaggcatccccagggccccaccaagagggtctaacacaggcctatgcccca
tcaggcaggagcctcgcacctagcgggggcagtggcagcagcttcgggcccacagactgg
ctcccgcagaccctggactcgctcccgtacgtctcccaggatcgcctggactcaggcatt
ggctccctggagagccagatgtcggaactttggggggttcgaggaggaggccctggtgag
ccgggcccaccccgagccccttacacgggctacagtccctatggatccgagctcccagcc
actgcggccttctctgcctttggccgggccatgggtgctggccacttcagtgtccctgcc
gactacccgcccccgccccctgcctttccgcctcgagagtactggtctgaaccgtaccca
ctgcccccacccacaccagtccttcaggagcccccagtgcagagcccaggggctggcagg
agcccatggggcagggcaggcaggctggccaaggagcaggccagcgtgtataccaagcta
tgtggtgtgtttcccccgcacctggtggaggctgtgatggggcgcttcccgcagctcctg
gacccccagcagctggctgccgagatcctctcctacaagtcccagcaccccagtgagtaa
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