Symphalangus syndactylus (siamang): 129469061
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Entry
129469061 CDS
T10134
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04151
PI3K-Akt signaling pathway
ssyn04510
Focal adhesion
ssyn04512
ECM-receptor interaction
ssyn04518
Integrin signaling
ssyn05165
Human papillomavirus infection
ssyn05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129469061
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129469061
04518 Integrin signaling
129469061
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129469061
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
129469061
09172 Infectious disease: viral
05165 Human papillomavirus infection
129469061
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ssyn00536
]
129469061
Glycosaminoglycan binding proteins [BR:
ssyn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129469061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_TEN
Pur_ac_phosph_N
EGF_Teneurin
DUF4998
Fn3_VIN3
EGF_2
EGF_Tenascin
DUF7949
Motif
Other DBs
NCBI-GeneID:
129469061
NCBI-ProteinID:
XP_055111206
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All DBs
Position
19:119870341..119943088
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AA seq
1299 aa
AA seq
DB search
MSLQEMFHFPLGLLLGSVLLVASAPATLEPPGCSNKEQQVTVSHTYKIDVPKSALVQVDA
DPQPLSDDGASLLALGEAGEEQNIIFRHNIRLQTPQKDCELAGSVQDLLARVKKLEEEMV
EMKKQCSAQRCCQGVTDLSRHCSGHGTFSLETCSCHCEEGREGPACEQLACPGACSGHGR
CVDGHCLCHEPYVGADCGYLACPENCSGHGECVRGMCQCHEDFMSEDCSEKRCPGDCSGH
GFCDTGECYCEEGFTGLDCAQVVAPQGLQLLKNTEDSLLVSWEPSSQVDHYLLSYYPLGK
ELSGKQIQVPKEQHSYEILGLLPGTKYILTLRNVKKEVSSSPQHLLATTDLAVLGTAWVT
DETENSLDVEWENPSIEVDYYKLRYGPMTGQEVAEVTVPKSSDPKSRYDITGLHPGTEYK
ITVVPVRGELEGKLILLNGRTEIDSPTNVVTDRVTEDTATVSWDPVHAVIDKYVVRYTSA
DGDTKEMAVHKDESSTVLTGLKPGEAYKVYVWAERGNQGSKKADTNALTEIDSPANLVTD
QVTENTATISWDPVQATIDKYVVHYTSADDQETREVLVGKEQSSTVLTGLRPGVEYTVHV
WAQKGDRESKKTDTNAPTAIDSPKNLVTDRVTENMATVSWDPVQAAIDKYVVRYTSADGE
TREVPVGKEQSSTVLTGLRPGMEYTVHVWAQKGDQESKKADTKAQTDIDSPQNLVTDRVT
ENMATVSWDPVQATIDRYVVRYTSAKDGETREVPVGKEQSSTVLTGLRPDVEYTVHVWAQ
KGAQESKKADTKAQTDIDSPQNLVTDRVTENTAIVSWDPVQATIDRYVVRYTSANGETRE
VPVGKEQSSTVLTGLRPGVEYTVHVWAQKGNQESKKADTKAQTEIDSPKNLVTDRVTENM
ATVSWDPVQATIDKYVVRYTSADGETREVPVGKEHSSTVLTGLRPGMEYMVHVWAQKGAQ
ESKKADTKAQTELDPPRNLHPSAVTQSGGVLTWTPPSAQIHGYILTYQFPDGTVKEMQLG
REDQRFELQGLEQGATYPVSLVAFKGSRRSRNVTTTLSTVGARFPHPSDCSQVQQNSNAA
SGLYTIYLHGDASRPLQVYCDMDTDGGGWIVFQRRNTGQLDFFKRWRSYVEGFGDPMKEF
WLGLDKLHNLTTGTPTRYEVRVDLQTANESAYAIYDFFQVASSKERYKLTVGKYRGTAGD
ALTYHNGWKFTTFDRDNDIALSNCALTHHGGWWYKNCHLANPNGRYGETKHSEGVNWEPW
KGHEFSIPYVELKIRPHVYSREPVLGRKKRTLGGRLRTF
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccaggagatgttccacttccccttggggctcctgcttggctctgtgctcctg
gtggcttcggccccagccactctggagcctcctggctgcagcaacaaggagcaacaggtc
actgtcagccacacctacaagatcgatgtgcccaagtctgccttggttcaggtggatgct
gaccctcagcccctcagtgacgatggggcttcgctcttggccctgggggaggccggggag
gaacagaacatcatcttcaggcacaacatccgccttcagacaccacagaaggactgcgag
ttggcaggcagtgtccaggacctcctggcccgggtgaagaagctggaggaagagatggtg
gagatgaagaaacagtgtagtgcccagcgctgctgccagggagttactgatctgagccgc
cactgcagcggccacgggaccttctccctggagacctgcagctgccactgcgaggagggc
agggagggccccgcctgcgagcagctggcctgccctggggcgtgcagtggtcacgggcgt
tgcgtggacgggcactgcctgtgccacgagccctacgtgggtgctgactgcggctacctg
gcctgccctgagaactgcagcgggcatggcgagtgcgtgcgcggcatgtgccagtgccac
gaggacttcatgtcggaggactgcagcgagaagcgctgtcccggcgactgcagcggccac
ggcttctgcgacacgggcgagtgctactgcgaggagggcttcacaggcctggactgtgcc
caggtggtcgccccacagggcctgcagctgctcaagaacacggaggattctctgctggtg
agctgggagccctccagccaggtggatcactacctcctcagctactaccccctggggaag
gagctctctgggaagcagatccaagtgcccaaggagcagcacagctacgagattcttggt
ttgctgcctggaaccaagtacatactcaccctgcgtaacgtcaagaaagaagtttctagc
agcccacagcatctacttgccaccacagaccttgctgtgcttggcactgcctgggtgaca
gatgagactgagaactccctcgacgtggagtgggaaaacccctcaattgaggtggactac
tacaagctgcgatatggccccatgacagggcaggaggtagctgaggtcactgtgcccaag
agcagtgaccccaagagccgatatgacatcactggtctgcacccagggaccgagtataag
atcacggtggtacccgtgagaggagagctggagggcaagctgatccttctgaatggcagg
acagaaattgacagtccaaccaatgttgtcactgatcgagtgactgaagacacagcaact
gtctcctgggacccagtgcacgccgtcatagacaagtatgtggtgcgctacacctctgct
gatggggacaccaaggaaatggcagtgcacaaggacgagagcagcactgtcctgacgggc
ctgaagccaggagaggcatacaaggtctatgtgtgggctgaaaggggcaaccaggggagc
aagaaagctgacaccaatgccctcacagaaattgacagcccagcaaacctggtgactgac
caggtgactgagaataccgccaccatctcctgggacccggtgcaggccaccattgacaag
tacgtggtgcactacacctctgctgacgaccaagagaccagagaggttctggtggggaag
gagcagagcagcactgtcctgacaggcctgaggccaggtgtggagtacacagtgcatgtc
tgggcccagaagggggaccgagagagcaagaagactgacaccaacgccccgacagccatt
gacagccccaaaaacctggtgactgaccgggtgacagagaatatggccactgtctcctgg
gacccagtgcaggctgccattgacaagtacgtggtgcgctacacctctgctgatggagag
accagggaggttccagtggggaaggagcagagcagcaccgtcctgacaggcctgagaccg
ggcatggagtacacggtgcacgtgtgggcccagaagggggaccaggagagcaagaaggcc
gacaccaaggcccagacagacattgacagcccccaaaacctggtgaccgaccgggtgaca
gagaatatggccactgtctcctgggacccggtgcaagccaccattgacaggtatgtggtg
cgctacacctctgccaaggacggagagaccagggaggttccggtggggaaggagcagagt
agcactgtcctgacgggcctgaggccagatgtggagtacacggtgcacgtgtgggcccag
aagggggcccaggagagcaagaaggctgacaccaaggcccagacagacattgacagcccc
caaaacctggtcactgaccgggtgacagagaatacagccattgtctcctgggacccggtg
caagccaccattgacaggtatgtggtgcgctacacatctgccaacggagagaccagggag
gttccagtggggaaggagcagagcagcactgtcctgacgggtctgaggccaggcgtggag
tacacggtgcacgtgtgggcccagaaggggaaccaggagagcaagaaggctgacaccaag
gcccagacagaaattgacagccccaaaaacctggtgaccgaccgggtgacagagaatatg
gccactgtctcctgggacccggtgcaggccaccattgacaagtacgtcgtgcgctacacc
tctgccgacggagagaccagggaggttccggtggggaaggagcacagcagcactgtcttg
acgggcctgagaccgggcatggagtacatggtgcatgtgtgggcccaaaagggggcccag
gagagcaagaaggccgacaccaaggcccagacagaactcgaccctcccagaaaccttcat
ccatctgctgtgacgcagtctggtggcgtattgacctggacgcccccctctgctcagatc
cacggctacattctgacctaccagttcccagacggcacagttaaggagatgcagctggga
cgagaagaccagaggtttgagttgcaaggccttgagcaaggcgccacctaccctgtctcc
cttgttgcctttaagggtagtcggcggagcagaaatgtaactaccacactctccacagtt
ggtgcccgtttcccacacccttcggactgcagtcaggttcagcagaacagcaatgccgcc
agtggtctgtacaccatctacctgcacggcgatgccagccggccactgcaggtgtactgt
gacatggacacggacggaggtggctggattgtcttccagaggcggaacactgggcagctg
gatttcttcaagcgatggaggagctatgtggaaggctttggggaccccatgaaggagttc
tggcttggactagacaagctacacaacctcaccaccggcactccaacgcggtatgaggtg
agagtggatttacagactgccaatgaatccgcctatgctatatatgatttcttccaagtg
gcctccagcaaggagcggtataagctgacagttgggaaatacagaggcacagcaggggat
gctcttacttaccacaatggatggaagtttacaacgtttgacagagacaacgatattgca
ctcagcaactgtgccctgacgcatcatggtggctggtggtataagaactgccacttggcc
aaccccaatggcagatatggggagaccaagcacagtgagggggtgaactgggagccttgg
aaaggacatgaattctccattccttacgtggagttgaaaatccgccctcatgtctacagc
agggagcctgtcctgggcagaaagaagcggacgctgggaggaaggctgcgaacgttctga
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integrated database retrieval system