Symphalangus syndactylus (siamang): 129469616
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Entry
129469616 CDS
T10134
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04721
Synaptic vesicle cycle
ssyn04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
129469616 (RIMS1)
04721 Synaptic vesicle cycle
129469616 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129469616 (RIMS1)
Membrane trafficking [BR:
ssyn04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
129469616 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
129469616 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
129469616
NCBI-ProteinID:
XP_055112393
LinkDB
All DBs
Position
2:complement(50579767..51111354)
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AA seq
1692 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRD
MAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICH
KTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFF
GSGPQQTSQDGTLSDTATGAGSEVPREKKARLQERSRSQTPLSTAAASSQDAAPPSAPPD
RSKGAELSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKRVPKTSAQP
VEGAVEERERKERRESRRLEKGRSQDYPDTPEKRDEGKAADEEKQRKEEDYQTRYRSDPN
LARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPRTEAGAALPEGKAGKRAPAAARAS
PPDSPRAYSAERTAETRAPGAKQLTNHSPPAPRHGPVPAEAPELKAQEPLRKQSRLDPSS
AVLMRKAKREKVETMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGVST
PEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRV
ILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWN
GKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKME
RPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPARVDGRPRNP
YVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQE
EESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQR
SQRISDSDISDYEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRTTHHRSRSVSPHRGN
DQGKPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVEHRARDVDSQYLSEQDSEL
LMLPRAKRGRSAECLHTTRHVVRHYKTLPPKMPLLQSSSHWNIYSSILPAHTKTKSVTRQ
DISLHHECFNSRVLRFTDEILVSELQPFLDRARSASTNCLRPDTSLHSPERERGRWSPSL
DRRRPPSPRIQIQHASPENDRHSRKSERSSIQKQTRKGTASDAERVLPTCLSRRGHAAPR
ATDQPVIRGKHPARSRSSEHSSIRTLCSMHHLVPGGSAPPSPLLTRMHRQRSPTQSPPAD
TSFSSRRGRQLPQVPVRSSSIEQASLVVEERTRQMKMKVHRFKQTTGSGSSQELDREQYS
KYNIHKDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSERPRGRISSFT
PKMQGRRMGTSGRAIMKSTSVSGEMYTLERNDGSQSDTAVGTVGAGGKKRRSSLSAKVVA
IVSRRSRSTSQLSQTESGHKKLKSTIQRSTETGMAAEMRKMVRQPSRESTDGSINSYSSE
GNLIFPGVRLGADSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQLEVEVIRA
RSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQ
VIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSSLVDPTLTPLTRRASQSS
LESSTGPPCIRS
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggccgtggggccccgcggtcctcgcccacccacggtgcctccccccatgcaa
gagctgcccgacctgagccacctgaccgaagaggagaggaacattatcatggcagtgatg
gaccggcagaaggaagaggaggaaaaagaagaagccatgctcaagtgtgttgtcagggat
atggcgaagcctgctgcctgcaaaacaccaagaaatgctgaaaaccagccccaccaacct
tcaccgagattgcatcaacagtttgaaagctataaggaacaagtgagaaaaataggggaa
gaagcgcggcgttaccagggcgagcacaaagacgatgctccgacttgtggaatctgtcat
aaaacaaagtttgctgatgggtgcggtcatctctgctcctattgtcgcactaagttctgt
gcgcgctgcggaggccgcgtgtctctacggtcaaacaacgaggacaaagtggttatgtgg
gtatgcaatttatgtcgaaagcaacaagaaatcttaaccaaatctggagcatggttcttt
ggaagtggccctcagcagacaagtcaggatggaaccctgagtgatacagctacaggtgct
ggctctgaggtaccaagagaaaagaaagcacgactccaagagcgatcgcggtctcagaca
cccctgagcacagcagctgcctcctcccaggacgctgctcctcccagcgcaccgccagac
aggagcaaaggggctgagctctcacagcaagccttggggcctgaacagaagcaggcttca
tccaggtctagaagtgaacctcctagagagagaaagaagaccccagggctttccgagcag
aatggcaaaggagccctgaagagcgagcggaaacgcgtgccaaagacctcagcgcagccc
gtggagggggccgtcgaagaacgggagcgcaaagaaaggcgggaaagccgaaggcttgag
aaagggcgatcacaggattacccagacacgccggaaaaacgggacgagggcaaagcggcg
gatgaggaaaagcaaagaaaagaggaggactatcagaccaggtaccgcagcgacccgaac
ctggctcggtacccggtgaaaccgccgcctgaggagcagcagatgcgcatgcacgcccgg
gtgtcccgcgccaggcacgagcggcgccacagcgacgtggcgctcccgcgcaccgaggcg
ggcgcggcgctgccggagggcaaggccggcaaacgcgcgccggcggcggccagggcctcg
ccgccggactcgccgcgggcttactcggctgagaggactgctgagaccagggcgccgggc
gccaagcagctaacgaaccacagcccgccggcgcccagacatgggccggttcccgctgaa
gccccggagctcaaagcccaggagcccctcaggaagcagagccgcctggaccccagctcg
gcggtcctcatgcggaaggccaagcgcgagaaggtggagaccatgctgcggaacgactct
ctgagctcagaccagtcggagtcggtgcggccgtccccgcccaagccgcaccggtctaag
aggggcggcaagaagcggcagatgtcggtgagcagctctgaggaggagggcgtgtcgacg
cccgagtacaccagctgcgaggacgtggagctagagagcgagagcgttagcgagaaaggt
gatttggattattactggttggatcctgccacgtggcacagccgggagacatcacctatt
agttcgcatcctgtaacgtggcaaccatctaaagagggggaccgattaattggacgtgtt
attcttaacaagagaacaaccatgcccaaagaatcaggtgcattgctgggtctgaaagtt
gttggaggaaaaatgactgacttaggacgacttggtgctttcatcaccaaagtaaagaag
ggtagcctagcagatgtagttggacacctaagagcaggggatgaagttctagaatggaat
ggtaaacccctgccgggagctacaaatgaagaagtttacaacattattttagaatcaaaa
tcagaacctcaagttgaaattattgtttcaaggcctattggtgacattccccggattcct
gagagctctcaccctccgctggagtccagttcaagttcctttgaatctcagaagatggaa
aggccttccatttctgttatttctccaacaagtcctggagctctaaaagatgccccacaa
gtcttaccagggcaactttctgtgaagttgtggtatgataaagtggggcaccagctgatt
gtaaatgtcctgcaagcaacagatctacctgctagagtagatgggcgtcctcgaaatccc
tatgtaaaaatgtattttcttccagatagaagtgataaaagtaaaaggaggacaaaaaca
gtaaagaaaatactagaaccaaaatggaatcaaacttttgtctattcgcatgtacatcgt
agagattttagagaacgaatgttagaaataactgtgtgggaccaaccaagagttcaagaa
gaagaaagtgaatttcttggagagatcctcatagaattggagacagcgcttttagatgat
gaaccgcattggtataaacttcagacacatgatgagtcttcactacctctgcctcagcca
tcacctttcatgccaaggcgacatattcatggagaaagctctagcaaaaagctacaaaga
tctcagcgaatcagtgatagtgacatctcagattatgaggttgatgatggtattggcgta
gttcctccagtaggctataggtctagtgctagagaaagtaaatctacaacattaactgtg
ccagaacagcaaagaacaactcatcaccgctcacgttcagtatctcctcatcgcggcaat
gatcagggaaagccgcgttcacgtttaccaaatgtgccattacagaggagtttagatgaa
attcatccaacaagaaggtcacgttctccaaccagacaccatgatgcctcccgaagtcca
gttgaacatagagccagagatgtggatagtcagtatttatcagaacaagacagtgagctt
cttatgctgcccagagcaaaacgaggacgaagtgcagaatgcctacatactaccagacat
gttgttaggcactataaaacattacctcccaagatgcctttattacagagcagttctcac
tggaatatttacagctcaattctgcctgcacatactaagaccaaatcagtgactagacag
gacatttcccttcatcatgagtgctttaactcaagagtattgagatttactgatgaaata
ctggttagtgaactgcagccctttcttgacagggctaggagtgctagtaccaactgcttg
agaccagatactagtttgcattcaccagaacgagaaaggggtagatggtccccctcccta
gataggagacgacctcctagtcccaggattcaaatccagcatgcgtctccggagaatgac
aggcactccagaaagtctgaaagatctagcatccaaaaacagactaggaaaggcactgcc
tctgatgcagaaagggttctcccaacatgtctttctagaaggggacatgcagccccaaga
gcaactgatcagccagtcattaggggaaaacatcctgctcgctcaaggtcgagtgagcac
tctagtatcagaacactgtgttctatgcaccaccttgtccctggagggtcggcgccacct
tctccgcttctgacaagaatgcaccgacagagaagtccaacacaatctcctccagcagac
acatcgttcagcagtcgcaggggaagacagctcccacaagtgccagtgagaagcagcagt
atagaacaagcaagcttagtagtggaggagcgaacaagacagatgaaaatgaaagtgcat
cgatttaagcagacaacagggtctggttctagtcaagaacttgatcgcgagcaatattcc
aagtataacatacataaagatcagtacagaagctgtgataacgtctctgccaaatcatca
gatagtgatgtcagtgatgtttccgccatttcccgaaccagcagtgcctcacgcctcagc
agcacaagctttatgtcagagcaatctgagcgccccaggggtagaatcagttcatttacc
cccaaaatgcaaggcagacggatgggaacttcaggaagagccattatgaagagcaccagt
gtgagcggagagatgtacacactggagcgtaatgacggcagccagtcagacacagccgtg
ggtacagttggagcaggtggaaagaaacggagatccagccttagtgccaaagtggttgcc
atagtgtctcgaaggagtagaagcacatcccagcttagtcaaacagagtcgggccacaaa
aagttaaaaagtaccatccagagaagcacagaaacaggcatggcagctgaaatgagaaag
atggtaaggcagccgagccgagagtctactgatggcagcatcaacagttacagctctgag
ggcaatttaatatttcctggagtgcgactgggagctgacagtcaattcagtgattttctt
gatggattgggaccagcccagctcgttggccgccaaacccttgccacccctgcaatgggt
gatatacaaattggaatggaggacaaaaagggccaattagaagtagaagtcattagagca
cgaagcctcacacaaaagcctggttccaaatctacacctgctccatatgtcaaagtctat
cttttggaaaatggggcctgtatagccaagaagaagacaagaattgcacgaaaaaccctt
gatcctttgtatcagcagtctctggtttttgatgaaagtccacagggtaaagttcttcag
gtgattgtctggggagactatggcagaatggaccacaaatgctttatgggtgtggctcag
atcttgttggaagaactcgacctgtccagcatggtgattggatggtacaaattgttccca
ccgtcctcactggtggatcccacactcactcccctcacccgccgggcttcccagtcatct
ctggaaagttcaactgggcctccctgtattcgatcatag
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integrated database retrieval system
