KEGG   Symphalangus syndactylus (siamang): 129469842
Entry
129469842         CDS       T10134                                 
Symbol
PER1
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn04710  Circadian rhythm
ssyn04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    129469842 (PER1)
   04713 Circadian entrainment
    129469842 (PER1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssyn03400]
    129469842 (PER1)
DNA repair and recombination proteins [BR:ssyn03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    129469842 (PER1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 129469842
NCBI-ProteinID: XP_055112954
LinkDB
Position
20:60178241..60194086
AA seq 1285 aa
MSGPLEGADGGGDPRPGESFCPGGVPSPGPPQHRPCPGPSLADDTDANSNGSSGNESNGH
ESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPS
TSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQE
YYQQWSLEEGEPCSMDMSTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAAV
LLRCKRDVFRGTRFSELLAPQDVGVFYGSTAPSRLPTWGTGASAGSGLRDFTQEKSVFCR
IRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRIF
TTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPF
DHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPAPSPVP
SLDTDIQELSEQIHRLLLQPVHSPSPTGLCGVGPVTSPGPLHSPGSSSDSNGGDAEGPGP
PAPVTFQQICKDVHLVKHQGQQLFIESRARPQPRPRLPATGTFKAKVLPCQSPDPELETG
SAPIQAPLALAPEEAERKEASSCSYQQINCLDSILRYLESCNLPSTTKRKCASSSSCTTS
SASDDDKQRTGPVSVGTKKDPPSAVLSGEGATPRKEPVVGGTLSPLALANKAESVVSVTS
QCSFSSTIVHVGDKKPPESDIIMMEDPPGLAPGPAPSPTVAPDPAPDAYRPVGLTKAVLS
LHTQKEEQAFLSRFRDLGRLRGLDSSSTAPSALGERGCHHGPAPPSRRHHCRSKAKRSRH
HQNPRAEAPCYVSHPSPVPPSTPWPTPPATTPFPAVVQPYPLPVFSPRGGPQPLPPAPTS
VPPAAFPAPLVTPMVALVLPNYLFPTPSSYPYGALQTPAEGPPTPASHSPSPSLPALPPS
PPHRPDSPLFNSRCSSPLQLNLLQLEELPRAEGAAVAGGPGSSAGPPPPSEEAAEPEARL
VEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLGSGLGSGSGSGSQEGGSTSAS
ITRSSQSSHTSKYFGSIDSSEAEAGAARGGAEPGDQVIKYVLQDPIWLLMANADQRVMMT
YQVPSRDMTSVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDVMACVD
CGSSTQDPAHPDDPLFSELDGLGLEPMEEGGGEQGSSGGGSGEGEGCAEAQGGAKASGSP
DLAMEEEEDRSSSCPALSTAGNCAS
NT seq 3858 nt   +upstreamnt  +downstreamnt
atgagtggccccctagaaggggctgatgggggaggggaccccaggcctggggaatcattt
tgtcctgggggcgtcccatcccctgggcccccacagcaccggccttgcccaggccccagc
ctggccgatgacaccgatgccaacagcaatggttcaagcggcaatgagtccaacgggcat
gagtctagaggcgcatctcagcggagctcacacagctcctcctcgggcaacggcaaggac
tcagcccttctggagaccactgagagcagcaagagcacaaactctcagagcccatcccca
cccagcagttccattgcctacagcctcctgagtgccagctcagagcaggacaacccatcc
accagtggctgcagcagtgaacagtcagcccgggcgaggacccagaaggaactcatgaca
gcacttcgagagctcaagcttcgactgccgccagagcgccggggcaagggccgctctggg
accctggccacgctgcagtacgcactggcctgtgtcaagcaggtgcaggccaaccaggaa
tactaccagcagtggagcctggaggagggcgagccttgctccatggacatgtccacctat
accctggaggagctggagcacatcacgtctgagtacacgcttcggaaccaggataccttc
tcagtggctgtctccttcctgacgggccgaatcgtctacatttcggagcaggcagctgtc
ctgctgcgttgcaagcgggacgtgttccggggtacccgcttctctgagctcctggctccc
caggatgtgggagtcttctatggttccactgctccatctcgtctgcccacctggggcaca
ggggcctcagcaggttcaggcctcagggactttacccaggagaagtccgtcttctgccgt
atcagaggaggtcctgaccgggatccagggcctcggtaccagccattccgcctaaccccg
tatgtgaccaagatccgggtctcagatggggcccctgcacagccgtgctgcctgctgatt
gcagagcgcatccattcgggttacgaagctccccggataccccccgacaagaggattttc
actacacggcacacacccagctgcctcttccaggatgtggatgaaagggctgcccccctg
ctgggctacctgccccaggacctcctgggagccccagtgctcctgttcctgcatcctgag
gaccgacccctcatgctggctatccacaagaaaatcctgcagttggcgggccagcccttt
gaccactcccctatccgcttctgtgcccgcaacggggagtatgtcaccatggacaccagc
tgggctggctttgtgcacccgtggagccgcaaggtagccttcgtgttgggccgccacaaa
gtacgcacggcccccttgaatgaggacgtattcactcccccggcccccagcccagttcca
tccctggacactgatatccaggagctgtcagagcagatccaccggctgctgctgcagccc
gtgcacagccccagccccacaggactctgtggagtcggccccgtgacatccccaggccct
ctccacagccctgggtcctccagtgatagcaacgggggtgatgcagaggggcctgggcct
cctgcgccagtgactttccagcagatctgtaaggatgtgcatctggtgaagcaccagggc
cagcagctttttattgagtctcgggcccggcctcagccccggccccgcctccctgctaca
ggcacgttcaaggccaaggtccttccctgccaatccccagacccagagctggagacgggt
tctgctcccatccaggccccactagccttggcccctgaggaggctgagaggaaagaagcc
tctagctgctcctaccaacagatcaactgcctggacagcatcctcaggtacctggagagc
tgcaacctccccagcaccactaagcgtaaatgtgcctcctcctcctcctgtaccacctcc
tcagcctctgacgatgacaagcagaggacaggtccagtttctgtggggaccaagaaagat
ccgccgtcagcagtgctgtctggggagggggccaccccacggaaggagccagtggtggga
ggcaccctgagcccgctcgccctggccaataaggcggagagcgtggtgtccgtcaccagt
cagtgtagcttcagctccaccatcgtccatgtgggagacaagaagcccccggagtcggac
atcatcatgatggaggacccgcctggcctagccccaggcccagcccctagccccacagta
gcccctgacccagccccagatgcctaccgtccagtggggctgaccaaggccgtgctgtcc
ctgcacacacagaaggaagagcaagccttcctcagccgcttccgagacctgggcaggctg
cgtggactcgacagctcttccacagctccctcagcccttggcgagcgaggctgccaccac
ggccccgcacccccaagccgccgacaccactgccgatccaaagccaagcgctcacgccac
caccagaaccctcgggctgaagcgccctgctatgtctcacacccctcacccgtgccaccc
tccaccccctggcccaccccaccagccactacccccttcccagcggttgtccagccctac
cctctcccagtgttctctcctcgaggaggcccccagcctcttccccctgctcccacatct
gtgcccccggctgctttccctgcccctttggtgaccccaatggtggccttggtgctccct
aactatctgttcccaaccccatccagctatccttatggggcactccagacccctgctgaa
gggcctcccactcctgcctcgcactccccttctccatccttgcccgccctcccccccagc
cctcctcaccgcccggactctccactgttcaactcgagatgcagctctccactccagctc
aatctgctgcagctcgaggagctcccccgtgctgagggggctgcagttgcagggggccct
gggagcagtgccgggcccccacctcccagtgaggaagctgctgagccagaggccagactg
gtggaggtcactgagtcctccaatcaggacgcactttccggctccagtgacctgctggaa
cttctgctgcaagaggactcgcgctccggcacaggctctgcagcctcgggctccttgggc
tctggcttgggctctgggtctggttcaggctcccaggaggggggcagcacctcagccagc
atcactcgcagcagccagagcagccacacaagcaaatactttggcagcatcgactcttct
gaggctgaggctggggctgctcggggcggggctgagcccggggaccaggtgattaagtac
gtgctccaggatcccatttggctgctcatggccaatgctgaccagcgcgtcatgatgacc
taccaggtaccctccagggacatgacctctgtgctgaagcaggatcgggagcggctccga
gccatgcagaagcagcagcctcggttttctgaggaccagcggcgggaactgggcgctgtg
cactcctgggtccggaagggccaactgcctcgggctcttgatgtgatggcctgtgtggac
tgtgggagcagcacccaagatcctgctcaccctgatgacccactcttctcagagctggat
ggactggggctggagcccatggaagagggtggaggcgagcagggcagcagcggtggcggc
agtggtgagggtgagggctgcgcggaggcccaaggcggggccaaggcttcaggttctccg
gacttggccatggaggaggaggaagacaggagctcatcctgtccagccttatctacagca
ggaaactgcgccagctag

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