Symphalangus syndactylus (siamang): 129469949
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Entry
129469949 CDS
T10134
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04080
Neuroactive ligand-receptor interaction
ssyn04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129469949
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
129469949
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssyn04040
]
129469949
Ion channels [BR:
ssyn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129469949
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
129469949
NCBI-ProteinID:
XP_055113162
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Position
20:65679789..65705288
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AA seq
839 aa
AA seq
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MKKWSSTDSGAAADPLQQDTCPDPLDGDPNSRPPPAKPQLSTAKSRTRLFGKGDSEEAFP
VDCPHEEGELDSCPTITVSPVIIIQRPGDGPTGARLLSQDSVTASTEKTLRLYDRRSIFE
AVAQNNCQDLESLLLFLQKSKKHLTDNEFKDPETGKTCLLKAMLNLHDGQNDTIPLLLDI
ARQTDSLKEFVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGADVQAAAHGDFFKKT
KGRPGFYFGELPLSLAACTNQLGIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTA
DNTKFVTSMYNEILILGAKLHPTLKLEELTNKKGMTPLALAAGTGKIGVLAYILQREIQE
PECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSDTPNRHDMLLVEPLN
RLLQDKWDRFVKRIFYFNFLIYCLYMIIFTMAAYYRPVDGVPPFKMEKTEDYFRVTGEIL
SVLGGVYFFFRGIQYFLQRRPSMKTLFVDSYSEMLFFLQSLFMLATVVLYFSHRKEYVAS
MVFSLALGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYVVFLFGFSTAVVTLIE
DGKNDSLPSESTSHRWRGPGWRPPDSSYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVF
TILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKA
FRSGKLLQVGYTPDGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGVKRTLSFSLRS
SRVSGRHWKNFALVPLLREASGRDRHSAQPEEVHLRQFSGSLKPEDAEVFKSPAASGEE
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatggagcagcacagactcgggggcggctgcggacccactccaacaggacacc
tgcccagaccccctggatggagaccctaactccaggccacctccagccaagccccagctc
tccacggccaagagccgcacccggctctttgggaagggtgactcggaggaggctttcccg
gtggattgccctcacgaggaaggtgagctggactcctgcccgaccatcacagtcagccct
gttatcatcatccagaggccaggagacggccccaccggtgccaggctgctgtcccaggac
tctgtcaccgccagcaccgagaagaccctcaggctctatgatcgcaggagtatctttgaa
gccgttgctcagaataactgccaggatctggagagcctgctgctcttcctgcagaagagc
aagaagcacctcacggacaacgagttcaaagaccctgagacagggaagacctgtctgctg
aaagccatgctcaacctgcacgatgggcagaacgacaccatccccctgctcctggacatc
gcgcggcagacggacagcctgaaggagtttgtcaatgccagctacacggacagctactac
aagggccagacagcgctgcacatcgccatcgagaggcgcaacatggccctggtgaccctc
ctggtggagaacggagcagacgtccaggctgcggcccatggggacttctttaagaaaacc
aaagggcggcctggattctacttcggtgaactgcccctgtccctggccgcgtgcaccaac
cagctgggcatcgtgaagttcctgctgcagaactcctggcagccggccgacatcagcgcc
agggactcggtgggcaacacggtgctgcacgccctggtggaggtggccgacaacacggcc
gacaacaccaagtttgtgacgagcatgtacaatgagattctgatcctgggggccaaactg
cacccgaccctgaagctggaggagctcaccaacaagaagggaatgacgccgctggctctg
gccgccgggaccgggaagatcggggtcttggcctatattctccagcgggagatccaggag
cctgagtgcaggcacctgtccaggaagttcaccgagtgggcctacgggcccgtgcactcc
tcgctgtacgacctgtcctgcatcgacacctgcgagaagaactcggtgctggaggtgatc
gcctacagcagcagcgacacccctaatcgccacgacatgctcttggtggagccgctgaac
cgactcctgcaggacaagtgggacagattcgtcaagcgcatcttctacttcaacttcttg
atctactgcctctacatgatcattttcaccatggctgcctactacaggcccgtggatggc
gtgcctccctttaagatggaaaaaactgaagactatttccgagtaactggagagatcctg
tctgtgttaggaggagtctacttctttttccgagggattcagtatttcctgcagaggcgg
ccatcgatgaagaccctgtttgtggatagctacagtgagatgcttttctttctgcagtca
ctgttcatgctggccaccgtggtgctatacttcagccaccgcaaggagtacgtggcttcc
atggtgttctccctggccttgggctggaccaacatgctctactacacccgcggtttccag
cagatgggcatctacgccgtcatgatagagaagatgatcctgagagacctgtgccgtttc
atgttcgtctacgtcgtcttcttgtttgggttttccacagcggtggtgacgctgatcgaa
gacgggaagaacgactccctgccgtctgagtccacgtcgcacaggtggcgggggcctggc
tggaggccacccgatagctcctacaacagcctgtactccacctgcctggagctgttcaag
ttcaccatcggcatgggcgacctggagttcaccgagaactacgacttcaaggctgtcttc
accatcctgctgctggcctacgtaattctcacctacatcctcctgctcaacatgctcatc
gccctcatgggtgagactgtcaacaagatcgcacaggagagcaagaacatctggaagctg
cagagagccatcaccatcctggacacggagaagagcttccttaagtgcatgaggaaggcc
ttccgctcaggcaagctgctgcaggtgggatacacccctgatggcaaggacgactacagg
tggtgcttcagggtggacgaggtgaactggaccacctggaacaccaacgtgggcatcatc
aacgaagacccgggcaactgtgagggcgtcaagcgcaccctgagcttctccctgcggtca
agcagagtttcaggcagacactggaagaactttgccctggtcccgcttttaagagaggca
agtggtcgagataggcactctgctcagcctgaggaagttcatctgcgacagttttcaggg
tctctgaagccagaagacgctgaggtcttcaagagtcctgccgcttccggggaggagtga
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