Symphalangus syndactylus (siamang): 129470399
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Entry
129470399 CDS
T10134
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X2
KO
K14323
protein CASC3
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03013
Nucleocytoplasmic transport
ssyn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129470399 (CASC3)
03015 mRNA surveillance pathway
129470399 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyn03019
]
129470399 (CASC3)
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129470399 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
129470399
NCBI-ProteinID:
XP_055114162
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All DBs
Position
20:40685013..40717034
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AA seq
702 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPLRGGGSCSGSAGGGGSGSLPSQRGGRIGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAVNASTKEEKGEEKPDTKSTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRYGSSPQRDPNWNGERLNKSHRHQGLGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRSGETVKHEISYRSRRLEQTPVR
DPSPEADAPVLGSPEKEEAASETSAAAPDTAPPPPDRPIEKKSYSRARRTRTKVGDAVKL
AEEVPPPPEGLIPAPPVPETTPTPPTKTGNWEAPVESTTSGLEQDVAQLNIAEQNWSPGQ
PSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQSGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPVYTHGDSSAPLPPQGMLVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGPLPPPPPHLYPNTQAPSQVY
GGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgccggcggcagcgcgcttctcaagacaccgaggacgaggaatctggtgct
tcgggctcagacagcggcggctccccgttgcggggaggcgggagctgcagcggtagcgcc
ggaggcggcggcagcggctctctgccttcacagcgcggaggccgaatcggggcccttcat
ctgcggcgggtggagagcgggggcgccaagagcgctgaggagtcggagtgtgagagtgaa
gatggcattgaaggtgatgctgttctctcggattatgaaagtgcagaagactcggaaggt
gaagaaggtgaatacagtgaagaggaaaactccaaagtagagctgaaatcagaagctaat
gatgctgttaatgcttcaacaaaagaagagaagggagaagaaaagcctgacaccaaaagc
actgtgactggagagaggcaaagtggggacggacaggagagcacagagcctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaatccagca
tacatacctcggaaagggctcttctttgagcatgatcttcgagggcaaactcaggaggag
gaagtcagacccaaggggcgtcagcgaaagctgtggaaggatgagggtcgctgggagcat
gacaagttccgggaagatgagcaggccccaaagtcccgacaggagctcattgctctttat
ggttatgacattcgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
ccccgatatgggagttctccacaaagagatccaaactggaacggtgagcggctaaacaag
tctcatcgccaccagggtcttgggggcaccctaccaccaaggacatttattaacaggaat
gctgcaggtactggccgtatgtctgcacccaggaattattctcgatccgggggcttcaag
gaaggtcgtgctggttttaggcctgtggaagctggtgggcaacatggtggccggtctggt
gagactgttaagcatgagattagttaccggtcacggcgcctagagcagactcctgtgagg
gatccatctccagaagcagatgctccagtgcttggcagtcctgagaaggaagaggcagcc
tcagagacatcagctgctgctcctgatactgcaccaccaccccctgacaggcccattgag
aagaaatcctattcccgggcaagaagaacccgaaccaaagttggagatgcagtcaagctt
gcagaggaggtgccccctcctcctgaaggactgattccagcacctccagtcccagaaacc
accccaactccacctactaagactgggaactgggaagctccagtggaatctactacaagt
ggacttgagcaagatgtggcacaactaaatatagcagaacagaattggagtccggggcag
ccttctttcctgcaaccacgggaacttcgaggtatgcccaaccatatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagagtggtcgagccaaa
cgctattcatcccagcggcaaagacctgtgccagagccccccgcccctccagtgcatatc
agtatcatggagggacattactatgatccactgcagttccagggaccagtctatacccat
ggtgacagctctgccccgctgcctccacagggcatgcttgtgcagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccagctcctctgcccaatccaggcctctat
cccccaccagtgtccatgtctccaggacagccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggg
ccacttcctcccccaccgccgcatctatatcctaatacacaggccccatcacaggtatat
ggaggagtgacctactataaccccgcccagcagcaggtgcaaccaaagccctccccaccc
cggaggactccccagccagtcaccatcaagccccctccacctgaggttgtaagcaggggt
tccagttaa
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