Symphalangus syndactylus (siamang): 129471073
Help
Entry
129471073 CDS
T10134
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
Enzymes [BR:
ssyn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129471073 (PDZRN3)
Ubiquitin system [BR:
ssyn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
129471073 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129471073
NCBI-ProteinID:
XP_055115281
LinkDB
All DBs
Position
21:70064160..70307891
Genome browser
AA seq
1066 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAYAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALAKMSSPSPPVLDPYLLPEEHPSAHEYYDPNDYIGDIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHDEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSNPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCTDADYLGIPVDECERFRELLELKCQVKSAT
PYGLYYPSGPLDAGKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYRESWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLR
RAAEGISCPSSEGAVGTTEAYGPASKNLLSITEDPEVGTPTYSPSLKELDPNQPLESKER
RASDGSRSPTPSQKLGSAYLPSYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQM
SLVSMCKDLSSPTPSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTD
DDAVSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQAADDRKEMNILEL
SHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaagagctcaaccacgtcctgccgctcaagcgccttattctcaagctggacatc
aagtgcgcgtacgcggcgcgcggctgcggccgggtggtcaagctgcagcagctgccggag
cacctcgagcgctgcgacttcgcgcccgcgcgctgtcgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggcccgtgggc
cgctgccaggagggctgcgggctgcccttgacgcacggcgagcagcgcgcgggcggccac
tgctgcgcgcgagcgctgcgggcgcacaacggcgcgctgcaggcccgcctgggcgctctg
cacaaggcgctcaagaaggaggcgctgcgcgctgggaagcgcgagaagtcgctggtggcc
cagctggccgcggcgcagctcgagctgcagatgaccgcgctgcgctaccagaagaaattc
accgaatacagcgcgcgcctcgactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggtgaagaaaccaaaagcctgactcttgtcctgcatcgggactctggctccctggga
ttcaatattattggtggccggccgagtgtggataaccacgatggatcatccagtgaagga
atctttgtatccaagatagttgacagtgggcctgcagccaaggaaggaggcctgcaaatt
catgacaggattattgaggtcaacggcaaagacttatccagagcaactcatgaccaggct
gtggaagctttcaagacagccaaggagcccatagtggtgcaggtgttgagaagaacgcca
aggaccaaaatgttcacgcctccgtcagagtcgcagctggtggacacgggaacccaaacc
gacatcacctttgaacatatcatggccctcgctaagatgtcctctcccagcccacccgtg
ctggatccctatctcttgccagaggagcatccctcagcccatgaatactacgatccaaat
gactacattggagacatccatcaggagatggacagggaggagctggagctggaggaagtg
gacctctacagaatgaacagccaggacaagctgggcctcactgtgtgctaccggacggac
gatgaagacgacattgggatttatatcagtgagattgaccctaacagcattgcagccaag
gatgggcgcatccgagaaggagaccgcattatccagattaatgggatagaggtgcagaac
cgtgaagaggctgtggctcttctaaccagtgaagaaaataaaaacttttcattgctgatt
gcaaggcctgaactccagctggatgagggctggatggacgatgacaggaacgactttctg
gatgacctgcacatggacatgctggaggagcagcaccaccaggccatgcaattcacagct
agcgtgcttcagcagaagaagcacgacgaagacggtgggaccacagatacagccaccatc
ttgtccaaccagcacgagaaggacagcggtgtggggcggaccgacgagagcacccgcaat
gacgagagctcggagcaagagaacaacggcgacgacgccacggcatcctccaacccgctg
gcggggcagaggaagctcacctgcagccaggacaccttgggcagcggcgacctgcccttc
agcaacgagtccttcatttcggccgactgcacggacgccgactaccttgggatcccggtg
gacgagtgcgagcgcttccgcgagctcctggagctcaagtgccaggtgaagagcgccacc
ccttacggcctgtactaccctagcggccccctggacgccggcaagagtgaccctgagagc
gtggacaaggagctggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctg
agcatcgtgcgcgcccacaagatgcagcagctcaaggagcagtaccgcgagtcctggatg
ctgcacaacagcggcttccgcaactacaacaccagcatcgacgtgcgcaggcacgagctc
tcagacatcaccgagctcccggagaaatccgacaaggacagctcgagcgcctacaacaca
ggcgagagctgccgcagcaccccgctcaccctggagatctcccccgacaactccttgagg
agagcggcggagggcatcagctgcccgagcagcgaaggggccgtggggaccacggaagcc
tacgggccagcctccaagaatctgctctccatcacggaagatcccgaagtgggtacccct
acctatagcccgtccctgaaggagctggaccccaaccagcccctggaaagcaaagagcgg
agagccagcgatgggagccggagccccacgcccagccaaaagctgggcagcgcctacctg
ccatcctaccaccactccccatacaagcacgcgcacatcccggcgcacgcccagcactac
cagagctacatgcagctgatccagcagaagtcggccgtggagtatgcgcaaagccagatg
agcctggtgagcatgtgcaaggacctgagctctcccacaccgtcggagccgcgcatggag
tggaaggtgaagatccgcagtgacgggacacgctacatcaccaagaggcccgtgcgggac
cgcctgctgcgggagcgcgccctgaagatccgggaagagcgcagcggcatgaccaccgac
gacgacgcggtgagcgagatgaagatggggcgctactggagcaaggaggagaggaagcag
cacctggtgaaggccaaggagcagcggcggcggcgcgagttcatgatgcagagcaggttg
gattgtctcaaggagcagcaagcagccgacgacaggaaggagatgaacattctcgaactg
agccacaaaaagatgatgaagaagaggaataaaaaaatcttcgataactggatgacgatc
caagaactcttaacccacggcacaaaatccccggacggcactagagtatacaattccttc
ctatcggtgactactgtataa
DBGET
integrated database retrieval system
