Symphalangus syndactylus (siamang): 129472024
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Entry
129472024 CDS
T10134
Symbol
PTAFR
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04020
Calcium signaling pathway
ssyn04080
Neuroactive ligand-receptor interaction
ssyn05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129472024 (PTAFR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129472024 (PTAFR)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
129472024 (PTAFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ssyn04030
]
129472024 (PTAFR)
G protein-coupled receptors [BR:
ssyn04030
]
Rhodopsin family
Others
Platelet activating factor
129472024 (PTAFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CitMHS
SHNi-TPR
SK_channel
Motif
Other DBs
NCBI-GeneID:
129472024
NCBI-ProteinID:
XP_055117336
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Position
22:9586229..9623573
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AA seq
342 aa
AA seq
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MEPRDSSHIDSEFRYTLFPIVYSVIFVLGVIANGYVLWVFARLYPSKKFNEIKIFMVNLT
MADMLFLITLPLWIVYYQNQGNWILPKFLCNVAGCLFFINTYCSVAFLGVITYNRFQAVT
RPIKTAQANTRKRGISLSLVIWVATVGAASYFLILDSTNTVPNSAGSGNVTRCFEHYEKG
SVPVLIIHIFIVFSFFLVFLIILFCNLVIIRTLLMQPVQQQRNAEVKRRALWMVCTVLAV
FIICFVPHHVVQLPWTLAELGFQDSKFHQAINDAHQVTLCLLSTNCVLDPVIYCFLTKKF
RKHLTEKFYSMRSSRKCSRATTDTVTEVVVPFNQIPGNSLKN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagccacgtgactcctcccacatagactctgagttccgatacaccctcttcccgatt
gtttacagcgtcatctttgtgcttggagtcattgctaatggctacgtgctgtgggtcttt
gcccgcctgtacccttccaagaaattcaatgagataaagatcttcatggtgaacctcacc
atggcggacatgctcttcttgatcacgctgccgctgtggattgtctactaccaaaaccag
ggcaactggatcctccccaaattcctgtgcaatgtggctggctgccttttcttcatcaac
acctactgctcggtggccttcctgggtgtcatcacttataaccgcttccaggcagtaact
cggcccatcaagactgctcaggccaacacccgcaagcgtggcatctctttgtccctggtc
atctgggtggccactgtgggagctgcatcctacttcctcatcctggactccaccaacaca
gtgcccaacagtgctggctcaggcaacgtcactcgctgctttgagcattacgagaagggc
agcgtgccagtcctcatcatccacatcttcatcgtgttcagcttcttcctggtcttcctc
atcatcctcttctgcaacctggtcatcatccgtaccttgctcatgcagccggtacagcag
cagcgcaacgctgaagtcaagcgccgggcgctgtggatggtgtgcacggtcttggcggtg
ttcatcatctgcttcgtgccccaccacgtggtgcagctgccctggacccttgctgagctg
ggcttccaggacagcaaattccaccaggccattaacgatgcacatcaggtcaccctctgc
ctccttagcaccaactgtgtcttagaccctgttatctactgtttcctcaccaagaagttc
cgcaagcacctcaccgaaaagttctacagcatgcgcagtagccggaaatgctcccgggcc
accacggatacggtcactgaagtggtcgtgccattcaaccagatccctggcaattccctc
aaaaattag
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