KEGG   Symphalangus syndactylus (siamang): 129472079
Entry
129472079         CDS       T10134                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129472079 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssyn03019]
    129472079 (WDR33)
Messenger RNA biogenesis [BR:ssyn03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     129472079 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Collagen WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 129472079
NCBI-ProteinID: XP_055117435
LinkDB
Position
22:complement(41017302..41120957)
AA seq 1336 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQVEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRESQGPAPQGMMMGHPPQEMRGPHPPGGLLGHGPQEMRGPQEIRGMQGPP
PQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI
PFQQQKTPLLGDGPRAPFNQEGQSTGPPPLIPGLGQQGSQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGPMSERRHEQSGGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGR
RPGDERFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDGFPGPEDFGPEENFDASE
EAARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPR
PDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGK
GRGGPGPAQRVPKSGRSSSLDGEHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMN
SGPPRRGASRGGGRGR
NT seq 4011 nt   +upstreamnt  +downstreamnt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccagcaccag
gcacctcgacagctgttttataagcgacctgattttgcacaacagcaagcaatgcaacag
cttacgtttgatggaaaacgaatgagaaaagctgtgaaccgaaaaaccatagactacaat
ccatctgtaattaagtatttggagaacagaatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggttattacaatgatctggtcccacctataggaatgttgaat
aatcctatgaatgcagtaacaacaaagtttgttcggacatcaacaaataaagtaaagtgt
cctgtatttgttgttaggtggactccagaaggaagacgcttggtcactggagcttctagt
ggagagtttaccttgtggaatggactcactttcaattttgaaacaatattacaggctcac
gacagcccagtgagggccatgacgtggtcacataatgacatgtggatgttgacagcagac
cacggaggatatgtgaaatactggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgctgatgtgaaatgtgtagactggcatccaaccaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaagtgaaattaaacctcaatggc
aattggctactcacagcatcacgtgatcatctctgtaaactttttgatatcagaaacctg
aaagaagagcttcaagtcttccgaggtcataagaaagaagccacagcggtggcctggcat
cctgttcatgaaggactttttgccagtggagggtctgatggttctttgttattctggcat
gttggggtagagaaggaagtcggtgggatggagatggcccacgaagggatgatctggagt
ctggcttggcatcctcttgggcatattctctgctcgggctcaaatgaccatactagcaaa
ttctggactcgaaaccgaccaggtgataaaatgcgagatcgatataatctaaacctttta
cccggaatgtctgaagatggagtagaatatgatgaccttgaacccaatagcctggcagta
attccaggaatgggaataccagaacaactaaaattagctatggaacaagaacagatgggg
aaagatgaatcaaatgaaattgaaatgacaattccaggtttagattggggaatggaggaa
gtgatgcaaaaggatcagaaaaaagtacctcagaagaaagttccttatgcaaaacccatt
cctgctcagttccagcaggcttggatgcaaaataaagttccaattcctgctccaaatgag
gtgctgaatgacagaaaagaagacattaaattggaagagaagaaaaaaacacaagcagaa
attgagcaagaaatggctacattacaatatactaacccgcaacttctggagcaacttaaa
attgaaagacttgcacagaaacaagttgagcaaattcagcctcctccctcgtctggtacc
cctctcctcggaccccagccttttccaggacaaggtccaatgtctcagattcctcaaggt
tttcaacagccccatccatctcagcagatgccaatgaacatggctcagatggggcctcca
ggtccacagggacagtttaggcctcctggaccccagggacaaatgggaccacaaggtcct
ccactgcatcagggaggtggggggccacaaggattcatgggaccacagggaccccagggc
ccaccccaggggttgccacggcctcaggatatgcatgggccccaaggaatgcagaggcat
cctggacctcatggccctttgggacctcaagggccacctggaccacaaggtagttctggt
cctcaaggtcatatgggtcctcagggtccacctggcccacagggtcacataggcccccaa
ggtccacctggccctcagggtcacttgggcccacaggggcctccgggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaagggcctcctcatcctcatgggatccaaggc
ggaccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcaggggcctccaggcccccgggagagccagggtcctgctccccaaggg
atgatgatgggccacccgcctcaagagatgagaggacctcaccctccaggtggactactg
ggacacggccctcaggaaatgagaggtcctcaggagatccgaggcatgcaggggcctcca
ccccaaggatcaatgctgggacctccccaggaattgcgagggcctccaggctcacaaagt
cagcaggggccgccccagggctctttaggacctccaccccagggtggcatgcaaggaccc
cccggacctcagggacagcagaacccagcaagagggccacatccatctcaagggccaata
ccattccagcaacagaaaacgcctctgctaggtgatgggccccgggcccccttcaaccag
gaaggacagagcacaggccccccacccctgataccaggcctagggcagcagggatcacaa
ggtcgcattccccctctgaaccccggacaaggacctggccccaacaaaggtgactcccgc
ggccctccaaaccatcacatgggcccgatgtcagagaggcgacatgagcagagcggcggg
cctgagcatgggcccgagagggggcctttccggggtggccaggactgcaggggtccccct
gataggcgtggccctcacccagacttccccgatgacttcagcagaccagatgacttccac
cctgacaagcgctttggccaccggttacgtgaatttgaggggcgaggaggacctttaccg
caagaagagaagtggaggcgagggggccctgggcctccgtttccccctgatcacagggaa
ttcagcgagggggatggccggggtgcagcccgaggccctccgggggcatgggaaggccgc
aggcccggagatgaacgtttcccccgggatcccgaggacccacgttttcgagggcgcaga
gaagaaagtttcagaagaggagccccaccgaggcatgagggccgtgctcctcccagagga
agggatggttttcctggtcctgaagactttggtccagaggagaattttgatgcttctgag
gaagcggcccgaggacgagatctcagaggtcgaggtcggggtaccccacgaggaggaagg
aagggtttacttcccactcctgacgagttccctcgctttgaaggagggcggaagccagat
tcctgggatggaaacagagagcctgggccaggtcatgaacattttcgtgatgctccccgc
cctgatcatccccctcacgacggtcattccccagccagcagagaacgctcttcttctctc
caaggcatggacatggcatccctacctccccgaaagcgcccctggcatgatggcccaggc
acttctgagcacagagagatggaggccccaggaggcccttctgaagatcgaggaggcaaa
ggccgagggggcccaggacctgcccagagagtgcccaaatctgggcgttccagctcctta
gacggagagcaccacgatggataccacagagatgaaccttttgggggccctccaggcagt
ggcaccccttctcgagggggccggagtggcagtaactggggtagagggagtaacatgaac
tctggcccgccgaggcgaggagcttcacggggtggtggaaggggtcggtag

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