KEGG   Symphalangus syndactylus (siamang): 129472088
Entry
129472088         CDS       T10134                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn03020  RNA polymerase
ssyn03420  Nucleotide excision repair
ssyn05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129472088 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129472088 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    129472088 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssyn03021]
    129472088 (POLR2D)
   03400 DNA repair and recombination proteins [BR:ssyn03400]
    129472088 (POLR2D)
Transcription machinery [BR:ssyn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     129472088 (POLR2D)
DNA repair and recombination proteins [BR:ssyn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129472088 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 129472088
NCBI-ProteinID: XP_055117461
LinkDB
Position
22:complement(41157947..41170849)
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcgggtggcagcgatccgcgggctggcgacgtagaggaggacgcctcacagctc
atctttcctaaagagtttgaaacagctgagacacttctaaattcagaagttcatatgctt
ctggaacatcgaaagcaacagaatgagagtgcagaggatgaacaggagctctcagaagtc
ttcatgaaaacattaaactacacagcccgtttcagtcgtttcaaaaacagagagaccatt
gccagtgttcgtagcttgctactccagaaaaagcttcataagtttgagttggcctgtttg
gccaacctttgcccagaaactgctgaggagtccaaggctctaatcccaagcttggaggga
cggtttgaagatgaggagctgcagcagattcttgatgatatccagacaaagcgcagcttt
cagtattaa

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