Symphalangus syndactylus (siamang): 129472334
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Entry
129472334 CDS
T10134
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssyn04515
]
129472334 (CLSTN1)
Cell adhesion molecules [BR:
ssyn04515
]
Cadherins
Cadherin related
129472334 (CLSTN1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
EphA2_TM
Toxin_R_bind_N
V_ATPase_I
Glyco_hydro_16
Cadherin_C_2
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
129472334
NCBI-ProteinID:
XP_055117843
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All DBs
Position
22:27051735..27142106
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AA seq
981 aa
AA seq
DB search
MLRRPAPALAPVARLLLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLI
ALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSKEKLDCEL
QKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYD
SILRVEAVDADCSPQFSQICSYEIITPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGALAVFPNIHLETCDEPVASVQ
ATVELETSHIGKGCDRDTYSEKSLHRLCGAAAGTAELLPSPSGSLNWTVGLPTDNGHDSD
QVFEFNGTQAVRIPDGIVSVSPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSL
YVHGCRLIFLLRQDPSEEKKYRPAEFHWKLNQVCDEEWHHYVLNVEFPSVTLYVDGTSHE
PFSVTEDYPLHPSKIETQLVVGACWQEFSGVENDNETEPVTVASAGGDLHMTQFFRGNLA
GLTLRSGKLADKKVIDCLYTCKEGLDLQVPEDSGRGVQIQAHPSQLVLTLEGEDLGELDK
AMQHISYLNSRQFPTPGIRRLKITSTIKCFNEATCISVPPVDGYVMVLQPEEPKISLSGV
HHFARAASEFESSEGVFLFPELRIISTITREVEPEGDGAEDPTVQESLVSEEIVHDLDTC
EVTVEGEELNHEQESLEVDMARLQQKGIEVSSSELGMTFTGVDTMASYEEVLHLLRYRNW
HARSLLDRKFKLICSELNGRYISNEFKVEVNVIHTANPMEHANHMAAQPQFVHPEHRSFV
DLSGHNLANPHPFAVIPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDAGKENE
MDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSADSESSEEEEGEQ
GDPQNATRQQQLEWDDSTLSY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccccgcgcccgcgctggccccggtcgcccggctgctgctggccgggctg
ctgtgcggcggcggggtctgggccgcgcgagttaacaagcacaagccctggctggagccc
acctaccacggcatagtcacagagaatgacaacacggtgctcctcgaccccccgctgatc
gcactggacaaagatgcgcctctgcgatttgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaaaattcacgggcagaatgtcccctttgatgcagtggta
gtggataaatccactggtgagggagtcattcgctccaaagaaaaactggactgtgagctg
cagaaagactattcattcaccatccaggcctatgattgtgggaagggacctgatggcacc
aacgtgaaaaagtctcataaagcaactgtccatattcaggtgaacgacgtgaacgagtac
gcgcccgtgttcaaggagaagtcctacaaagccacggtcatcgaggggaagcagtacgac
agcattttgagggtggaggccgtggatgccgactgctcccctcagttcagccagatttgc
agctacgaaatcatcactccagacgtgccctttactgtcgacaaagatggttatataaaa
aacacagagaaattaaactacgggaaagaacatcagtataagctgaccgtcactgcctat
gactgtgggaagaaaagagccacagaagatgttttggtgaagatcagcattaagcccacc
tgcacccctgggtggcaaggatggaacaacaggattgagtatgagccgggtacaggcgcg
ttggccgtcttcccaaatatccacctggagacatgtgacgagccagtcgcctcagtacag
gccacagtggagctagaaaccagccacatagggaaaggctgcgaccgagacacctactcg
gagaagtccctccaccggctctgtggtgcggccgcgggcactgccgagctgctgccatcc
ccgagtggctccctcaactggaccgtgggcctgcccaccgacaatggccatgacagtgac
caggtgtttgagttcaacggcacccaggcagtgaggatcccagatggcatcgtgtcggtc
agccccaaagagccgttcaccatctccgtgtggatgagacatgggccattcggcaggaag
aaggagacaattctttgcagttctgataaaacagatatgaatcggcaccactactcactc
tacgtccacgggtgccggctgatcttcctcctccgtcaggatccttctgaggagaagaaa
tacagacctgcagagttccactggaagttgaatcaggtctgtgatgaggaatggcaccac
tacgtcctcaatgtggaattcccgagcgtgactctctatgtggatggcacatcccacgag
cccttctctgtgactgaggattacccgctccatccatccaagatagaaactcagctcgtg
gtgggggcttgctggcaagagttttcaggagttgaaaatgacaatgaaactgagcctgtg
actgtggcctctgcaggtggcgacctgcacatgacccagtttttccgaggcaatctggct
ggcttaactctccgttctgggaaactcgcggataagaaggtgatcgactgtctgtatacc
tgcaaggaggggctggacctgcaggtccccgaagacagtggcagaggcgtgcagatccaa
gcacaccccagccagttggtattgaccttggagggagaagaccttggggaattggataag
gccatgcagcacatctcgtacctgaactcccggcagttccccacgcccggaattcgcaga
ctcaaaatcaccagcacaatcaagtgttttaacgaggccacctgcatttcggtccccccg
gtagatggctacgtgatggttttacagcctgaggagcccaagatcagcctgagcggtgtc
caccattttgcccgagcagcttctgaatttgaaagctcagaaggagtgttccttttccct
gagcttcgcatcatcagcaccatcacgagagaagtggagcctgaaggggacggggctgag
gaccccacagttcaagaatcactagtgtccgaggagatcgtgcatgacctggatacctgt
gaggtcacggtggagggagaggagctgaaccacgagcaggagagcctagaggtggacatg
gcccgcctgcagcagaagggcatcgaagtgagcagctctgagctgggcatgaccttcaca
ggtgtggacaccatggccagctacgaggaggttttgcacctgctgcgctaccggaactgg
cacgccaggtccttgcttgaccggaagtttaagctcatctgctcggagctgaatggccgc
tacatcagcaacgaatttaaggtggaggtgaatgtaatccacacggccaaccccatggaa
cacgccaaccacatggctgcccagccacagttcgtgcacccggaacaccgctcctttgtt
gacctgtcaggccacaacctggccaacccccacccgtttgcagtcatccccagcactgcg
accgttgtgattgtggtgtgcgtcagcttcctggtgttcatgattatcctgggggtattt
cggatccgggctgcacatcagcggaccatgcgggatcaggacgcggggaaggagaacgag
atggactgggacgactccgccctgaccatcaccgtcaaccccatggagacctacgaggac
cagcacagcagtgaggaggaggaggaagaggaggaggaagaggagagtgaggacggcgag
gaagaagatgacatcaccagcgcagactcagagagcagcgaggaggaggagggggagcag
ggcgacccccagaacgcaacccggcagcagcagctggagtgggatgactccaccctcagc
tactga
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