KEGG   Symphalangus syndactylus (siamang): 129472335
Entry
129472335         CDS       T10134                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn03082  ATP-dependent chromatin remodeling
ssyn03083  Polycomb repressive complex
ssyn04110  Cell cycle
ssyn04213  Longevity regulating pathway - multiple species
ssyn04330  Notch signaling pathway
ssyn04350  TGF-beta signaling pathway
ssyn04613  Neutrophil extracellular trap formation
ssyn04919  Thyroid hormone signaling pathway
ssyn05016  Huntington disease
ssyn05031  Amphetamine addiction
ssyn05034  Alcoholism
ssyn05165  Human papillomavirus infection
ssyn05169  Epstein-Barr virus infection
ssyn05200  Pathways in cancer
ssyn05202  Transcriptional misregulation in cancer
ssyn05203  Viral carcinogenesis
ssyn05206  MicroRNAs in cancer
ssyn05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129472335 (HDAC2)
   03083 Polycomb repressive complex
    129472335 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    129472335 (HDAC2)
   04350 TGF-beta signaling pathway
    129472335 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    129472335 (HDAC2)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    129472335 (HDAC2)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    129472335 (HDAC2)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    129472335 (HDAC2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    129472335 (HDAC2)
   05202 Transcriptional misregulation in cancer
    129472335 (HDAC2)
   05206 MicroRNAs in cancer
    129472335 (HDAC2)
   05203 Viral carcinogenesis
    129472335 (HDAC2)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    129472335 (HDAC2)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    129472335 (HDAC2)
   05165 Human papillomavirus infection
    129472335 (HDAC2)
  09164 Neurodegenerative disease
   05016 Huntington disease
    129472335 (HDAC2)
  09165 Substance dependence
   05031 Amphetamine addiction
    129472335 (HDAC2)
   05034 Alcoholism
    129472335 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssyn03036]
    129472335 (HDAC2)
Enzymes [BR:ssyn01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     129472335 (HDAC2)
Chromosome and associated proteins [BR:ssyn03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     129472335 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     129472335 (HDAC2)
    BRAF-HDAC complex
     129472335 (HDAC2)
    REST complex
     129472335 (HDAC2)
    SHIP complex
     129472335 (HDAC2)
    MiDAC complex
     129472335 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     129472335 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    129472335 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    129472335 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 129472335
NCBI-ProteinID: XP_055117850
LinkDB
Position
2:complement(91816127..91847368)
AA seq 579 aa
MRPPPCGLRRWFGGPLLASWCRCHPRFRAFGISAGWYRAFPAPPPLLPPACPSPRDYCPH
VSLSPFLSRPSRGGSSSSRRRSPEAAVAGEPMAYSQGGGKKKVCYYYDGDIGNYYYGQGH
PMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYS
KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS
GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGT
GDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSG
DRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNEL
PYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDA
VHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEE
DKKETEDKKADVKEEDKSKDNSGEKTDTKGTKSEQLSNP
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgcgcccacctccctgcggcctccggaggtggtttggtggccccctcctcgcgagttgg
tgccgctgccacccccgattccgagctttcggcatctctgccgggtggtaccgagccttc
ccggcgccccctcctctcctcccaccggcctgcccttccccgcgggactactgcccccac
gtttccctcagcccttttctctcccggccgagccgcggcggcagcagcagcagcaggagg
aggagcccggaggcggcggtggccggggagcccatggcgtacagtcaaggaggcggcaaa
aaaaaagtctgctactactacgacggtgatattggaaattattattatggacagggtcat
cccatgaagcctcatagaatccgcatgacccataacttgctgttaaattatggcttatac
agaaaaatggaaatatataggccccataaagccactgctgaagaaatgacaaaatatcac
agtgatgagtatatcaaatttctacggtcaataagaccagataacatgtctgagtatagt
aagcagatgcagagatttaatgttggagaagattgtccagtgtttgatggactctttgag
ttttgtcagctctcaactggcggttcagttgctggagctgtgaaattaaaccgacaacag
actgatatggctgttaattgggctggaggattacatcatgctaagaagtcagaagcatca
ggattctgttatgttaatgatattgtgcttgccatccttgaattactaaagtatcatcag
agagtcttatatattgatatagatattcatcatggtgatggtgttgaagaagctttttat
acgacagatcgtgtaatgactgtatcattccataaatatggggaatactttcctggcaca
ggagacttgagggatattggtgctggaaaaggcaaatactatgctgtcaattttccaatg
agagatggtatagatgatgagtcatatgggcagatatttaagcctattatctcaaaggtg
atggagatgtatcaacctagtgctgtggtattacagtgtggtgcagactcattatctggt
gatagactgggttgtttcaatctaacagtcaaaggtcatgctaaatgtgtagaagttgta
aaaacttttaacttaccattactgatgcttggaggaggtggctacacaatccgtaatgtt
gctcgatgttggacatatgagactgcagttgcccttgattgtgagattcccaatgagttg
ccatataatgattactttgagtattttggaccagacttcaagctgcatattagtccttca
aacatgacaaaccagaacactccagaatatatggaaaagataaaacagcgtttatttgaa
aatttgcgcatgttacctcatgcacctggtgtccagatgcaagctattccagaagatgct
gttcatgaagacagtggagatgaagatggagaagatccagacaagagaatttctattcga
gcatcagacaagcggatagcttgtgatgaagaattctcagattctgaggatgaaggagaa
ggaggtcgaagaaatgtggctgatcataagaaaggagcaaagaaagctagaattgaagaa
gataagaaagaaacagaggacaaaaaagcagacgttaaggaagaagataaatccaaggac
aacagtggtgaaaaaacagataccaaaggaaccaaatcagaacagctcagcaacccctga

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