Symphalangus syndactylus (siamang): 129472479
Help
Entry
129472479 CDS
T10134
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X2
KO
K16578
CLIP-associating protein 1/2
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssyn03036
]
129472479 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssyn04812
]
129472479 (CLASP1)
Chromosome and associated proteins [BR:
ssyn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
129472479 (CLASP1)
Cytoskeleton proteins [BR:
ssyn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
129472479 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
HEAT_2
HEAT_DAAF5
MMS19_N
ParcG
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
129472479
NCBI-ProteinID:
XP_055118110
LinkDB
All DBs
Position
22:49367290..49670540
Genome browser
AA seq
1559 aa
AA seq
DB search
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSTSSKAPPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRS
DIDVNAAASAKSKVSSSSGTTPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPDNR
GRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLAGGSSRGPPVTPSSEKRSKI
PRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLASRRHSR
STSALSTAESVGQSDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRRRYEPY
GMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGL
QNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVL
LTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAIL
KYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFT
MLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSH
GGLSPSRLWGWSADGLAKHPPPFSQPNSIPTAPSHKALRRSYSPSMLDYDTENLNSEEIY
SSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRGGGEVEGGRT
ALDNKTSLLNTQPPRAFPGPRARDYNPYPYSDAINTYDKTALKEAVFDDDMEQLRDVPID
HSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKD
HSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIH
PEQCIKVLCPIIQTADYPINLAAIKMQTKVVERIAKESLLQLLIDIIPGLLQGYDNTESS
VRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgcatggagtcctgcctggcgcaggtgttgcagaaggatgtggggaaacga
ttgcaggttggccaagaactgatagactatttctcggacaaacagaagtctgctgacctt
gagcatgatcagaccatgttagataaacttgtggatggacttgctacatcttgggtgaac
tccagcaattacaaggtggttctgctgggcatggacatcctgtccgccctggtgacccgg
ctgcaggatcggttcaaggcgcagatcggcacagtgctgccaagtctaatagacagacta
ggagatgctaaagactctgtgagggagcaggaccaaactctgctgctaaagatcatggat
caagctgctaatccccagtacgtatgggacagaatgcttggaggcttcaaacacaagaat
ttccgtactcgagaaggcatctgtctctgccttatagcaacactcaatgcctctggagca
cagactttaacactaagcaagattgtgccacatatatgcaacttacttggagatccaaac
agccaggttcgagatgcagcaataaacagcttagtggaaatttacagacatgtaggagaa
cgtgtgagggcagatctcagtaaaaaaggattgccacagtcccggttgaatgtaattttt
acaaaatttgatgaagtccagaaatctggaaacatgatacaatctgcaaatgataaaaat
ttcgatgatgaagattctgtggatggtaacagaccttcctctgctagttctacatcatcc
aaggctccaccaagttctcggagaaacgttggaatgggaaccacccgccggcttggttca
tccacccttggatccaagtcttcagctgcaaaagaaggagctggtgctgttgatgaagag
gattttattaaagcatttgatgatgtacctgtagtacagatttattccagccgagacctt
gaggaatccataaacaaaattagggaaatattatctgatgacaagcacgattgggagcag
agagtaaatgctctaaaaaagattagatctttacttttggctggtgctgctgagtatgat
aacttctttcaacatttgcgtcttttggatggagcctttaaactctctgctaaggatctg
cggtctcaggtagtgcgggaggcttgtatcacgttggggcatctgtcatcagttctgggg
aataagtttgaccatggagctgaagccattatgccaactatctttaatttaattccaaac
agtgccaaaattatggccacatctggtgttgtagctgttaggttaattattcggcacaca
cacatccctaggttaatacctgtcataacaagcaactgtacctctaagtctgtcgcagtt
agaaggcgctgttttgaatttttagatttgcttttacaagaatggcagacacattcacta
gaacgacacatatcagtattagctgaaacaataaagaagggaatacatgatgctgattct
gaagcaagaatagaagccagaaaatgttactggggtttccacagtcactttagcagagaa
gcagagcacttataccacaccttggagtcctcctaccagaaagccctgcagtcccacctg
aagaactcagacagcatagtgtctctgcctcagtcagaccgctcgtcttccagctctcaa
gagagtctaaatcgtccgctgtctgccaaaagaagtcctactggaagtaccacatctaga
gcttctacagttagtaccaaatctgtgtcaacgactgggtccctccagcgatctcgaagt
gatattgatgtgaacgcagcagccagtgccaaatccaaagtctcctcatcttcgggcaca
acgcctttcagctctgcagcggctttgcctccggggtcatacgcatccttaggtcggatc
cgcacaagacggcaaagctctgggagtgccaccaatgtcgcctctacacctgataaccgg
ggccgcagtcgcgctaaagtggtttcacagtcccagcgatccagatctgctaatcctgct
ggtgctggcagccggtcaagttccccaggaaaattgttgggaagtggttatggtggactt
gctgggggctcctcacgaggcccacctgtgacaccgtcttcagaaaagcgaagcaagatt
cccaggagccagggatgtagccgggaaacaagtccaaaccgaataggattagcacggagc
agccgtatccctcgacccagcatgagtcaggggtgcagccgcgataccagccgtgagagc
agccgagatacaagccctgctcggggctttcctccacttgcctctcgacgtcattccagg
tccactagtgctctctccactgctgaatctgttgggcagtcagatcggtttgggcttggc
cagccaggaagaatacccggttctgtgaatgccatgagagttctgagcacaagtacagat
cttgaagctgctgttgccgatgctttgaagaagcctgtgaggaggagatatgagccgtat
gggatgtattctgacgatgatgccaacagtgatgcctcaagtgtttgctctgagcgctca
tatggctccaggaatggtggcattccccattatctgcggcagactgaggatgtagcagaa
gttctcaaccactgtgctagttcaaactggtcagaaaggaaagaagggcttctgggcctg
cagaacttactgaagagccaaagaacactgagtcgagttgaactgaaaaggttatgtgag
atcttcactcggatgtttgctgaccctcatagcaagagagttttcagtatgtttttggag
actcttgtggattttataataattcataaggatgatttacaagactggctttttgttctt
ctcacacaattacttaagaaaatgggagcagatttacttggatctgtgcaagcaaaagtt
caaaaggctctagatgtcacaagggactcctttccatttgatcaacaatttaacattttg
atgagatttattgtggatcagactcaaactccaaacctcaaggtcaaagttgcaatcctg
aagtacattgagtctctggccagacagatggatccaacagattttgtaaactctagtgag
acaaggcttgctgtttctagaatcataacctggacaacagaaccaaagagttcagacgtg
agaaaggcagcacagattgtgctaatctctctgtttgaattgaatactcctgaatttacc
atgttacttggtgccttgccaaaaacattccaggatggtgccaccaaactcctgcacaac
cacctcaagaattccagtaacaccagtgtgggctctccaagcaatacaattggccggacg
ccctcccgacacaccagcagcaggaccagccccctgacctcacccaccaactgttcccat
gggggtctgtctccaagtcggttatggggttggagtgccgacgggttagcgaagcaccca
cctcccttttctcagcctaactccatccccaccgctccctcccacaaggctctcaggcgc
tcttactctcccagcatgctggactatgatacagagaacctgaactctgaagaaatctat
agttctctacgtggagttacagaagccattgaaaagtttagttttcgaagccaagaagat
ctgaatgagccaattaaacgagatggcaaaaaggagtgtgatattgtgtcccgcgatggg
ggcgctgcctcccctgccaccgagggccgggggggtggcgaggtagaaggaggccggaca
gctctggataacaagacctcgctactcaacacccagcctccgcgcgccttcccggggccg
cgggcgcgagactacaacccgtacccctactcagatgccatcaacacctacgacaagacc
gccctgaaagaggctgtgttcgatgacgacatggagcagcttcgagatgtgcccatcgac
cattctgacctggtggctgaccttctgaaagagctgtccaaccacaacgagcgagtggag
gaacggaagggagccctgctggagctgctcaagatcacgcgggaagacagccttggtgtc
tgggaggagcacttcaagaccattctgctcctgctgctggagacccttggagacaaagac
cattcaattcgagcactggcgttgagagttttgagggaaattctgagaaatcaaccagca
agatttaaaaactacgccgagctgacgattatgaagactctggaagcccacaaagactcc
cataaggaggtggtgagagcagctgaggaggctgcgtccacactggccagttccatccac
ccagagcagtgcatcaaggtgctctgccccatcatccagacggccgactaccccatcaac
cttgctgccatcaagatgcagaccaaagtcgtcgagaggatcgcgaaggagtcattgctg
cagctcctcatcgacatcatcccaggcttgctgcagggttatgacaacaccgaaagtagt
gtgcgtaaggccagcgtgttttgcttagtggcaatttattccgtaatcggagaagacctg
aaacctcaccttgcacagctcacagggagcaagatgaagctactaaacttatatataaag
agggcccagaccaccaacagcaacagcagctcctcctccgatgtctccacgcacagctaa
DBGET
integrated database retrieval system
