Symphalangus syndactylus (siamang): 129472601
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Entry
129472601 CDS
T10134
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssyn03041
]
129472601 (DDX18)
03009 Ribosome biogenesis [BR:
ssyn03009
]
129472601 (DDX18)
Enzymes [BR:
ssyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129472601 (DDX18)
Spliceosome [BR:
ssyn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129472601 (DDX18)
Ribosome biogenesis [BR:
ssyn03009
]
Eukaryotic type
90S particles
Helicases
129472601 (DDX18)
Pre-60S particles
129472601 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
129472601
NCBI-ProteinID:
XP_055118400
LinkDB
All DBs
Position
22:complement(53138054..53155829)
Genome browser
AA seq
671 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQGASNLTLSETQNGDVSEETMGSRKVKKSKQKP
MNVGLSETQNGDVSQEAVENVKVKKSPQKSTVLTNEEAAMQSPNSESKNKKKKKKRKMVN
DAGPDTKKAKTENKGQSEEESAETPKETENNVEKPDNDEDDSEVPSLPLGLTGAFEDTSF
ASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVE
LIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLA
NGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARRQ
TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF
LKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTL
LCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLR
YLKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIF
NVNNLNLPQVALSFGFKVPPFVDLNVNSNEGKQKKRGGGGGFGYQKTKKVEKSKIFKHIS
KKSSDSRQFSH
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacctgccgatgaaactcctgcgtaagaagatcgagaagcggaatctcaaattg
cggcagcggaacctgaagttgcagggggcctcaaatctgaccctatcagaaactcaaaat
ggagatgtatctgaagaaacaatgggaagtagaaaggttaaaaaatcaaaacaaaagccc
atgaacgtgggcttatcagaaactcaaaatggagacgtgtctcaagaagcagtggaaaat
gtaaaagttaaaaaatctccccagaaatccactgtactaaccaatgaagaggcagcaatg
cagtctcccaattcagaatccaaaaacaaaaagaagaagaaaaagagaaaaatggtgaat
gatgctgggcctgatacaaaaaaagcaaaaactgaaaacaaaggacaatctgaagaagaa
agtgctgagactcctaaagaaacagaaaataatgtggagaagccagataatgatgaagat
gacagtgaggtgcccagcctgcccctgggactgacaggagcttttgaggatacttcgttt
gcttctctatgtaatcttgtcaatgaaaacactctgaaggcaataaaagaaatgggtttt
acaaacatgactgaaattcagcataaaagtatcagaccacttctggaaggcagggatctt
ctagcagctgcaaaaacaggcagtggtaaaaccctggcttttctcatccctgcagttgaa
ctcattgttaagttaaggttcatgcccaggaatggaacaggagtccttattctctcacct
actagagaactagccatgcaaacttttggtgttcttaaggagctaatgactcaccacgtg
catacctatggcttgataatgggtggcagtaacagatctgctgaagcacagaaacttgct
aatgggatcaacatcattgtggccacaccaggccgtctgctggaccatatgcagaatacc
ccagggtttatgtataaaaacctgcagtgtctggttattgatgaagctgatcgtatcttg
gatgtggggtttgaagaggaattaaagcaaattattaaacttttgccagcacgtagacag
actatgctcttttctgccacccaaactcgaaaagttgaagacctggcaaggatttctctg
aaaaaggagccattgtatgttggcgttgatgatgataaagctaatgcaacagtggatggt
cttgagcagggatatgttgtttgtccttctgaaaagagattccttctgctctttacattc
cttaagaagaaccgaaagaagaagcttatggtcttcttttcatcttgtatgtctgtgaaa
taccactatgagttgctgaactacattgatttgcccgtcttggccattcatggaaagcaa
aagcaaaacaagcgtacaaccacattcttccagttctgcaacgcagattcaggaacacta
ttgtgtacggatgtggcagcgagaggactggacattcctgaagtcgactggattgttcag
tatgaccctccggatgaccctaaggaatatattcatcgtgtgggtagaacagccagaggc
ctaaatggaagagggcatgccttgctcattttgcgcccagaagaattgggttttcttcgc
tacttgaaacaatccaaggttccattaagtgaatttgacttttcctggtctaaaatttct
gacattcagtctcagcttgagaaattgattgaaaagaattactttcttcataagtcagcc
caggaagcatataagtcatacatacgagcctatgattcccattctctgaaacagatcttt
aatgttaataacttaaatttgcctcaagttgctctgtcatttggtttcaaggtgcctccc
ttcgttgatctgaacgtcaatagtaatgaaggcaagcagaagaagcgaggaggtggtggt
ggatttggctaccagaaaaccaagaaagttgagaagtccaaaatctttaaacacattagc
aagaagtcatccgacagcaggcagttctctcactga
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