Symphalangus syndactylus (siamang): 129473007
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Entry
129473007 CDS
T10134
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03320
PPAR signaling pathway
ssyn04659
Th17 cell differentiation
ssyn04919
Thyroid hormone signaling pathway
ssyn04920
Adipocytokine signaling pathway
ssyn04928
Parathyroid hormone synthesis, secretion and action
ssyn05200
Pathways in cancer
ssyn05202
Transcriptional misregulation in cancer
ssyn05207
Chemical carcinogenesis - receptor activation
ssyn05216
Thyroid cancer
ssyn05222
Small cell lung cancer
ssyn05223
Non-small cell lung cancer
ssyn05226
Gastric cancer
ssyn05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
129473007 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
129473007 (RXRB)
03320 PPAR signaling pathway
129473007 (RXRB)
04919 Thyroid hormone signaling pathway
129473007 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
129473007 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129473007 (RXRB)
05202 Transcriptional misregulation in cancer
129473007 (RXRB)
05207 Chemical carcinogenesis - receptor activation
129473007 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
129473007 (RXRB)
05216 Thyroid cancer
129473007 (RXRB)
05222 Small cell lung cancer
129473007 (RXRB)
05223 Non-small cell lung cancer
129473007 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
129473007 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssyn03000
]
129473007 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssyn03310
]
129473007 (RXRB)
Transcription factors [BR:
ssyn03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
129473007 (RXRB)
Nuclear receptors [BR:
ssyn03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
129473007 (RXRB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
129473007
NCBI-ProteinID:
XP_055119075
LinkDB
All DBs
Position
23:38532033..38539074
Genome browser
AA seq
536 aa
AA seq
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MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAGGEQQTP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLSQGVPPPSPPGPPLPPSTAPSLGGSGAPPP
PPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPV
DRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSL
SRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQ
KYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccgctcgcccgcccttcctccctcagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcggcggcggcggcggcggcggcaggcggagaacaacaaaccccg
gagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggactcccga
agcccagacagctcctccccaaatcccctttcccagggagtccctcccccttctcctcct
gggccacccctacccccttcaacagctccatcccttggaggctctggggccccaccccca
cccccgatgccaccacccccactgggctctccctttccagtcatcagttcttccatgggg
tcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagcccccag
attaattcaacagtgtcactccctgggggtgggtctggcccccctgaagatgtgaagcca
ccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggc
aaacggctgtgtgcaatctgcggggacagaagctcaggcaaacactacggggtttacagc
tgtgagggttgcaagggcttcttcaaacgcaccatccgcaaggaccttacatactcttgc
cgggacaacaaagactgcacggtggacaagcgccagcggaaccgctgtcagtactgccga
tatcagaagtgcctggccactggcatgaagagggaggcggtacaggaggagcgtcagcgg
ggaaaggacaaggatggggatggggagggggctgggggagcccccgaggagatgcctgtg
gacaggatcctggaggcagagcttgctgtggaacagaagagtgaccagggcgttgagggt
cctgggggaaccgggggtagcggcagcagcccaaatgaccccgtgactaacatctgtcag
gcagctgacaaacagctattcacgcttgttgagtgggcgaagaggatcccacacttttcc
tcgttgcctctggatgatcaggtcatattgctgcgggcaggctggaatgaactcctcatt
gcctccttctcacaccgatccattgatgttcgagatggcatcctccttgccacaggtctt
cacgtgcaccgcaactcagcccattcagcaggagtaggagccatctttgatcggtccctc
tccagggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagacagag
cttggctgcctgagggcaatcattctgtttaatccagatgccaagggcctctccaaccct
agtgaggtggaggtcctgcgggagaaagtgtatgcatcactggagacctactgcaaacag
aagtaccctgagcagcagggacggtttgccaagctgctgctacgtcttcctgccctccgg
tccattggccttaagtgtctagagcatctgtttttcttcaagctcattggtgacaccccc
atcgataccttcctcatggagatgcttgaggctccccatcaactggcctga
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