KEGG   Symphalangus syndactylus (siamang): 129473112
Entry
129473112         CDS       T10134                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
ssyn  Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssyn03400]
    129473112 (MDC1)
DNA repair and recombination proteins [BR:ssyn03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    129473112 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 129473112
NCBI-ProteinID: XP_055119348
LinkDB
Position
23:40896901..40918440
AA seq 2132 aa
MEDTQAIDWDVEEEEETEQSSESLRCNVEPVGRLHIFSGAHGPEKDFPLHLGKNVVGRMP
DCSVALPFPSISKQHAEIEILAWDKAPVLRDCGSLNGTQILRPPKVLSPGVSHRLRDQEL
ILFADLLCQYHRLDVSLPFVSRGPLTVEETPRVQGGTQPQKLLLAEDSEEEVDFLSERRV
VKKSRTTSSSVIIPESDEEGHSPVLGSLGPPFAFNLNSDTDAEEGQQPATEEASSAARRG
AIIEAEQSEAEVVTEIQLEKDQPLVKEGDDDTKVKRGAGNGVVPAGVILERSQPPEEDSD
TDMDDDSRPPGRPAEVHLERAQPFGFIDSDTDAEEEGIPATPVVIPMKKRKIFHGVGTRG
PEAPGLAHLQESQAGSDTDVEEDKDKAPQAVPLEKSQASMVINSDTDDEEEVSAALTLAR
LKESQPAIWNRDAEEDMAQRVVLLQQSQTTTERDSDTDVEEEELPVENKEAVLKGHTKIR
ALVRAHSEKDQPPFGDRDDSVEADKSSPGIYLERSQASTTVDINTQVEEEVPPGSAIVHI
KKHQVSVEGTNQTDVKAVGGPAKLLAVSLEEAWPLHGDCETDAEEGTSLAASAVADVRKS
QLPAEGDAGAQWAAAVLKQERAHEVGAQGGPPVAQVERDLPISRQNLTDVVVDTDTPGES
TQPQREGAQVPTGREREQHVGGTKDSEDNCGDSEDLDLQATQCFLENQGLEAVQSMEDEP
TQAFMLTPPQELGPSHCSFQTTGTLDEPWEVLATQPFCLRESEDSETQPFDTHLEAYGPC
LSPPRAIPGDQHPESPVHTEPMGIQGRGRQTVDKVMGIPKETAERVGPERGPLERETEKL
LPERQTDVTGEEELTKGIQDREQKQLLARDTQRQESDKNGGSASPERDRESLKVEIETSE
ETQEKQVQKQTLPSKAFEREVERPVADRECEPAELEEKVPKVILERDTQRGETEGGSQDQ
KGQASSPTPEPGVGAGDLPGPISAPVPSGNQSGGRGSPVSPRRHQKGLLNCKMPPAEKAS
RIRAAEKASSGDQESPDACLPPTVPEAPAPPQKPLNSQSQKHLAPQPLLSPLLPSIQPTV
RKTRQYGSQEAPETRLSSELEPFHPKPKIITRKSSRMTPFPATSAAPEPHPSTSTAQPVT
PKPTSQATRSRTNRSSVKTPEPVVPTAPELQPSTSTDQSVTSEPTSQATRGRKNRSSVKT
PETVVPTAPKLQPSTSTDRLATPKPTSRSTRSRTNMSSVKTPETAVPTAPELQPSTSTDQ
PVTPKPTSRTTRSRTNMSSVKIPESTVPIAPELPPSTSTEQPVTPEPTSQATTGRKNRSS
VKTPETVVPTAPKLQPSTSTEQPVTPEPTSQATTGRKNRSSVKTPETVVPTAPKLQPSTS
TDQPITPEPISQATRGRKNRSSVKTPETVVPTAPKLQPSTSTDQPITPEPTSQATRGRKN
RSSVKTPETVVPTAPKLQPSTSTDQPVTPEPTSQATRGRTNRSSVKTPETVVPTAPELQP
STSTDHLVIPEPTSQATRGRTDRSSVKTPETIVPTAPELQASASTDQPVTSKPTSRTTRG
RKNQSSVKTPETVVPTAPELQPSTSTDRPVTSEPTSQATRGRTNRSSVKTPESIVPIAPK
LQPSTSRNQLVTPEPTSRATRGRTNRSFVKTPEPVVPTAPEPHPTTSTDQPVTPKLTSRA
TRRRTNRSSVKTPKPVEPAASDLEPFTPTDQPVIPEAIAQGGQSKTLRSSTVRAMPVPTT
PEFQSPVTTDQPISPEPIPQLSCIKRQRATGNPGSLAAPIDHKPCSAPLEPKSWASRNQR
WEAVRAAESLTAIPEPASPQLLETPTHASQIQKVEPTGRSRFTPELQPKASQSRKRSLAT
MDSPLHQKPPQRWEVSQKTVIIKEEEEDTAEKPGKEEDVVTSKPGKRKRDQAEEEPNRIP
SRSLRRTKLNQESTAPKVLFTGVVDARGERAVLALGGSLACSAAEASHLVTDRIRRTVKF
LCAVGRGIPILSLDWLHQSRKAGFFLPPDEYVVTDPEQEKNFGFSLQDALSRARERRLLE
GYEIYVTPGVQPPPPQMGEIISCCGGTYLPSMPRSYKPQRVVITCPQDFPRCSVPLRVGL
PLLSPEFLLTGVLKQEAKPEAFVLYPLEMSST
NT seq 6399 nt   +upstreamnt  +downstreamnt
atggaggacacccaggctattgactgggatgttgaagaagaggaggagacagagcaatcc
agtgaatccttgaggtgtaacgtggagccagtagggcggctacatatctttagtggtgcc
cacggaccagaaaaagatttcccactacacctcgggaagaatgtggtaggccgaatgcct
gactgctctgtggccctgccctttccatctatctccaaacaacatgcagagattgaaatc
ttagcctgggacaaggcacctgtccttcgagactgtgggagccttaatggtactcaaatc
ctgagacctcctaaggttttgagccctggggtgagtcaccgtctgagggaccaggaattg
attctctttgctgacttgctctgccaataccatcgcctggatgtctctctgccctttgtc
tcccggggccctctgacagtagaagagacacccagggtacagggaggaactcaaccccag
aagcttctgttggctgaggactcggaggaggaagtagattttctttctgaaaggcgtgtg
gtaaaaaaatcaaggaccacatcttcctctgtgataattccagagagtgatgaagagggt
cattcccctgtcctgggcagccttggaccgccttttgccttcaatttgaacagtgacaca
gatgcggaagaaggtcagcaaccagccacagaggaggcctcctcagctgccagaagaggt
gccattatagaggcagagcagtctgaagctgaagttgtaactgaaatccagcttgaaaag
gatcagcctttagtgaaggagggggacgatgacacaaaagtcaagaggggtgcagggaat
ggagtggttccagctggggtgattctggagaggagccaacctcctgaagaggacagtgac
acagatatggatgatgacagcaggcctcctggaaggccagctgaggtccatttggaaagg
gctcagccttttggcttcatcgacagcgacactgatgcggaagaagaggggatcccagca
accccagttgtcattcctatgaagaaaaggaagatcttccatggagttggtacaaggggt
cctgaagcaccaggcctggcccatctgcaggagagccaggctggtagtgatacagatgtg
gaggaagacaaggacaaggccccacaggctgtccctctggagaaaagccaagcttccatg
gttatcaacagtgatacagatgatgaggaagaagtctcagcagcactgactttggcacgt
ctgaaagagagccagcctgctatatggaacagagatgcagaagaggacatggcccaacgt
gtggtccttctgcagcaaagccaaaccaccactgagagagacagtgacacagatgtggaa
gaggaagagctcccagtggaaaataaagaagctgtcctcaagggtcacacaaagattaga
gcccttgttagagcacattcagaaaaggaccaacctccttttggggaccgtgatgacagt
gtggaagcagataagagctcacctgggatctacctggagagaagccaagcctccaccaca
gtggacatcaacacacaagtggaggaggaagtcccgccagggtcagccattgtacatata
aagaaacatcaggtgtctgtggaggggacaaatcaaacagatgtgaaagcagttggagga
ccagcaaagctgcttgcggtatctctagaggaagcctggcctctgcatggggactgtgaa
acagatgcggaggagggcacctccttagcagcctcagcagttgcagatgtaagaaagagc
cagcttccagcagaaggggatgctggggcacagtgggctgcagctgttcttaagcaggag
agagctcatgaggtgggggcccagggtgggccacctgtggcacaagtggagcgggacctc
cctatctcaagacagaacctcacagatgtggtggtggacacagacactccaggggaatcc
acccagccacagagagagggagcccaggtccccacaggaagggagagagaacaacatgta
ggtgggaccaaggactctgaagacaactgtggtgattctgaagatctggacctacaggct
acccaatgctttctggagaatcagggcctggaagcagtccagagcatggaggatgaacct
acccaggccttcatgttgactccaccccaagagcttggcccttcccattgcagcttccag
acaacaggtaccctagatgaaccatgggaggtcctggctacacagccattctgtctgaga
gagtctgaggactctgagacccagccttttgacacccaccttgaggcctacggaccttgc
ctgtctccacctagggcaataccaggagaccaacatccagagagcccagttcacacagag
ccaatggggattcaaggcagagggaggcagactgtggataaagtcatgggtataccaaaa
gaaacagcagagagggtgggccctgagagagggccattggagagagaaactgagaaactg
ctaccagaaagacagacagatgtgacaggagaggaagaattaaccaaggggatacaggac
agagaacaaaaacagttgttagctagagacacccagagacaagaatctgacaaaaatggg
ggaagtgcaagtcctgaaagagatagggagagtttgaaggtagaaattgagacatctgag
gaaacacaagagaaacaagtacagaagcagacccttccaagcaaagcatttgagagagaa
gtagagagaccagtagcagacagagagtgcgagccagctgagttagaagagaaggtgccc
aaagtgatcctggagagagacacacagagaggggagacagagggagggagccaggaccag
aaagggcaggcctccagcccaacaccagagcctggggtgggggcgggggaccttccggga
cctatctcagcccccgtaccttctgggaaccagtcaggtggaaggggatccccagtgagc
cccaggaggcatcagaaaggcctcctgaattgcaagatgccacctgctgagaaggcttcc
aggatcagagctgctgagaaggcttccagcggcgatcaggaatctccagatgcttgtctg
cctcctacagtgcctgaagctccagccccaccccaaaagccccttaactctcagagccag
aaacatcttgcacctcagccccttctttctccccttttaccttctatccagccaaccgtt
cgtaagaccaggcaatatgggagtcaggaagctccagagactcgcttgtcctcagagctg
gagcctttccacccaaagcctaaaatcataactcggaagtcctccaggatgacacccttt
ccagctacctctgctgcccctgagccccacccttccacctccacagcccagccagtcact
cccaagcccacatctcaggccactaggagcaggacaaataggtcctctgtcaagacccct
gaaccagttgtccccacagcccctgagctccagccttccacctccacagaccagtctgtc
acctctgagcccacatctcaggctactaggggaagaaaaaatagatcctctgtcaagacc
cctgaaacagttgtccccacagcccctaagctccagccttccacctccacagaccgactt
gccacccccaagcccacatctcggtccactaggagcaggacaaatatgtcctctgtcaag
acccctgaaacagctgtccccacagcccctgagctccagccttccacctccacagaccaa
cctgtcacccctaagcccacatctcggaccactaggagcaggacaaatatgtcctctgtg
aaaatccctgaatcaactgtccctatagcccctgagctcccgccttccacctccacagag
cagcctgtcacccctgagcccacatctcaggctactacgggaagaaaaaataggtcctct
gtcaagacccctgaaacagttgtccccacagcccctaagctccagccttccacctccaca
gagcagcctgtcacccctgagcccacatctcaggctactacgggaagaaaaaataggtcc
tctgtcaagacccctgaaacagttgtccccacagcccctaagctccagccttccacctcc
acagaccagcctatcactcctgagcccatatctcaggctactaggggaagaaaaaatagg
tcctctgtcaagacccctgaaacagttgtccccacagcccctaagctccagccttccacc
tccacagaccagcctatcactcctgagcccacatctcaggctactaggggaagaaaaaac
agatcctctgtcaagacccctgaaacagttgtccccacagcccctaagctccagccttcc
acttccacagaccaacctgtcactcctgagcccacatctcaggccaccaggggcaggaca
aataggtcctctgtcaagacccctgaaacagttgtccccacagcccctgagctccagcct
tccacctccacagaccatcttgttatccctgagcccacatctcaggctactaggggaaga
acagatagatcctctgtcaagactcctgaaacaattgtccccacagcccctgagctccag
gcttctgcctccacagaccagcctgtcacctccaagcccacatctcggaccactagggga
agaaaaaatcagtcctctgtcaagacccctgaaacagttgtgcccacagcccctgagctc
cagccttccacctccacagaccgacctgtcacctctgagcccacatctcaggccactagg
ggcaggacaaataggtcctctgtcaagacccctgaatcaattgtccctatagcccctaag
cttcagccttctacctccagaaaccagcttgtcacccctgagcccacatctcgggccact
aggggcaggacaaataggtcctttgtcaagactcctgaaccagttgtccccacagcccct
gagccccatcctaccacctccacagaccagcctgtcacccccaagctcacatctagggcc
actaggagaaggacaaataggtcctctgtcaagactcccaaaccagttgaaccagcagcc
tctgatcttgagccttttactcccacagaccagcctgtcatccctgaggccatagctcag
ggtggtcagagcaaaacactgaggtcttccacagtaagagctatgccagttcctaccacc
cctgaattccaatctcctgtcaccacagaccagcctatttcccctgagcctattcctcaa
ctcagttgcatcaagaggcagagagccacggggaatcctggctccctcgcagctcccatt
gaccataagccttgctctgcacccttggaacctaaatcctgggcctcaaggaaccaaaga
tgggaagcagtgagagcagctgaatcccttacagccattcctgagcctgcctctccccag
cttcttgagacaccaactcatgcctcccagatccaaaaagtggaaccaacaggtagatct
aggttcaccccggagctccagcctaaggcctctcaaagccgcaagaggtctttagctacc
atggattcaccactacatcagaaaccgccccaaagatgggaagtctcccagaagacagtg
attatcaaggaagaggaagaagatactgcagagaagccagggaaggaagaggatgtcgtg
acttcaaaaccaggcaagagaaagagagaccaggcagaggaggagcccaacagaatacca
agccgcagcctccgacggaccaaacttaaccaagaatcaacagcccccaaagtgctcttc
acaggagtggtggatgctcggggagagcgggctgtgctggcactggggggaagtctggct
tgttcagcggcagaggcttcccacctggtcactgatcgcatccgcaggacagtcaagttc
ctgtgtgccgtggggcggggaatccccattctctccctggactggctgcatcagtcccgc
aaggctggttttttcttacccccggatgaatatgtggtgaccgaccctgagcaagagaag
aactttggctttagccttcaagacgcactgagccgggctcgggaacgaaggctgctagag
ggctatgagatctatgtgacccctggagtccagccaccaccacctcagatgggagagatc
attagctgctgtggaggcacatacctacccagcatgcctcggtcctataagcctcagaga
gttgtgatcacatgccctcaggacttccctcgttgttctgttccactgcgggttgggctg
ccgctcctgtcgcctgagttcctgctgactggagtgctgaagcaggaagccaagccagag
gcctttgtcctttaccctttggagatgtcatccacctga

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