Symphalangus syndactylus (siamang): 129473221
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Entry
129473221 CDS
T10134
Symbol
ATXN1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04330
Notch signaling pathway
ssyn05017
Spinocerebellar ataxia
ssyn05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129473221 (ATXN1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
129473221 (ATXN1)
05022 Pathways of neurodegeneration - multiple diseases
129473221 (ATXN1)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
PGC7_Stella
Motif
Other DBs
NCBI-GeneID:
129473221
NCBI-ProteinID:
XP_055119471
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Position
23:54578256..54607841
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AA seq
801 aa
AA seq
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MKSNQERSNECLPPKKREIPATSRSSEEKAPALPSDNHRVEGTAWLPGNPGGRGHGGGRH
GPAGTSVELGLQQGIGLHKALSTGLDYSPPSAPRSVPVATTLPAAYATPQPGTPVSPVQY
AHLPHTFQFIGSSQYSGTYASFIPSQLIPPTANPVTSAVASAAGATTPSQRSQLEAYSTL
LANMGSLSQTPGHKAEQQQQQQQQQQQQQQQHLSRAPGLITPGSPPPAQQNQYVHISSSP
QNTGRAASPPAIPVHLHPHQTMLPHTLTLGPPSQVVMQYADSGSHFVPREATKKAESSRL
QQAIQAKEVLNGEMEKSRRYGAPSSADLGLGKAGGKSVPHPYESRHVVVHPSPSDYSSRD
PSGVRASVMVLPNSNTPAADLEVQQATHREASPSTLNDKSGLHLGKPGHRSYALSPHTVI
QTTHSASEPLPVGLPATAFYAGTQPPVIGYLSGQQQAITYAGSLPQHLVIPGTQPLLIPV
GSTDMEASGAAPAIVTSSPQFAAVPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHL
PVVQSVASPAAAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSST
VERIEDSHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCS
KLSVGDVCISLTLKNLKNGSVKKGQPVDPASVLLKHSKADGLAGSRHRYAEQENGINQGS
AQMLSENGELKFPEKMGLPAAPFLTKIEPSKPAATRKRRWSAPESRKLEKSEDEPPLTLP
KPSLIPQEVKICIEGRSNVGK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagagcggagcaacgaatgcctgcctcccaagaagcgcgagatcccc
gccaccagccggtcctccgaggagaaggctcctgccctgcccagtgacaaccaccgggtg
gagggcacagcatggctcccgggcaaccctggtggccggggccacgggggcgggaggcat
gggccggcagggacctcggtggagcttggtttacaacagggaataggtttacacaaagca
ttgtccacagggctggactactccccgcccagcgctcccaggtctgtccctgtggccacc
acgctgcccgccgcgtatgccaccccgcagccagggaccccggtgtcccccgtgcagtac
gctcacctgccgcacaccttccagttcatcgggtcctcccaatacagcgggacctatgcc
agcttcatcccatcacagctgatccccccaaccgccaaccccgtcaccagtgcggtggcc
tcggctgcaggggccaccactccatcccagcgctcccagctggaggcctattccactctg
ctggccaacatgggcagtctgagccagacgccgggacacaaggctgagcagcagcagcag
cagcagcagcagcaacagcagcagcagcagcagcacctcagcagggctccggggctcatc
accccggggtcccccccacccgcccagcagaaccagtacgtccacatttccagttctccg
cagaacaccggccgcgccgcctctcctccggccatccccgtccacctccacccccaccag
acgatgctcccacacacgctcaccctggggcccccctcccaggtcgtcatgcaatacgcc
gactccggcagccactttgtccctcgggaggccaccaagaaagccgagagcagccggctg
cagcaggccatccaggccaaggaggtcctgaacggtgagatggagaagagccggcggtac
ggggccccgtcctcggccgacctgggcctgggcaaggcaggcggcaagtcggttcctcac
ccgtacgagtccaggcacgtggtggtccacccgagcccctcagactacagcagtcgtgat
ccttcaggggtccgggcctctgtgatggtcctgcccaacagcaacacgcccgcagctgac
ctggaggtgcaacaggccactcatcgtgaggcctccccctccaccctcaacgacaaaagt
ggcctgcatttagggaagcctggccaccggtcctacgcgctctcaccccacacggtcatt
cagaccacacacagtgcttcagagccactcccggtgggactgccagccacagccttctac
gcagggactcaaccccctgtcattggctacctgagcggccagcagcaagcaatcacctac
gccggcagcctgccccagcacctggtgatccccggcacacagcccctgctcatcccggtc
ggcagcactgacatggaagcatcgggggcagccccggccatagtcacgtcatccccccag
tttgctgcagtgcctcacacgttcgtcaccaccgcccttcccaagagcgagaacttcaac
cccgaggccctggtcacccaggccgcctacccagccatggtgcaggcccagatccacctg
cctgtggtgcagtccgtggcctccccggcggcggctccccctacgctgcctccctacttc
atgaaaggctccatcatccagttggccaacggagagctaaagaaggtggaagacttaaaa
acagaagatttcatccagagtgcagagataagcaatgacctgaagatcgactccagcacc
gtagagaggattgaagacagccatagcccgggcgtggccgtgatacagttcgccgtcggg
gagcaccgagcccaggtcagcgttgaagttttggtagagtatcctttttttgtgtttgga
cagggctggtcatcctgctgtccggagagaaccagccagctctttgatttgccgtgttcc
aaactctcagttggggatgtctgcatctcgcttaccctcaaaaacctgaagaatggctct
gttaaaaagggccagccggtggatcccgccagcgtcctgctgaagcactcaaaggccgac
ggcctggcgggcagcagacacaggtatgccgagcaggaaaacggaatcaaccaggggagt
gcccagatgctctctgagaatggcgaactgaagtttccagagaaaatgggattgcctgca
gcgcccttcctcaccaaaatagaacccagcaagcctgcggcaacgaggaagaggaggtgg
tcggcgccggagagccgcaaactggagaagtcagaagacgaaccacctttgactcttcct
aagccttctctaattcctcaggaggttaagatttgcattgaaggccggtctaatgtaggc
aagtag
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