Symphalangus syndactylus (siamang): 129473270
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Entry
129473270 CDS
T10134
Symbol
TAP2
Name
(RefSeq) antigen peptide transporter 2 isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn02010
ABC transporters
ssyn04145
Phagosome
ssyn04612
Antigen processing and presentation
ssyn05163
Human cytomegalovirus infection
ssyn05168
Herpes simplex virus 1 infection
ssyn05169
Epstein-Barr virus infection
ssyn05170
Human immunodeficiency virus 1 infection
ssyn05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129473270 (TAP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129473270 (TAP2)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
129473270 (TAP2)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
129473270 (TAP2)
05168 Herpes simplex virus 1 infection
129473270 (TAP2)
05163 Human cytomegalovirus infection
129473270 (TAP2)
05169 Epstein-Barr virus infection
129473270 (TAP2)
09163 Immune disease
05340 Primary immunodeficiency
129473270 (TAP2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssyn02000
]
129473270 (TAP2)
Enzymes [BR:
ssyn01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
129473270 (TAP2)
Transporters [BR:
ssyn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
129473270 (TAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_30
SMC_N
AAA_21
AAA_22
AAA_29
AAA_25
AAA_23
AAA_15
Zeta_toxin
SRP54
SAM_3
AAA_5
AAA_33
AAA_16
Motif
Other DBs
NCBI-GeneID:
129473270
NCBI-ProteinID:
XP_055119583
LinkDB
All DBs
Position
23:38911550..38933816
Genome browser
AA seq
703 aa
AA seq
DB search
MPLPDLRPWTSLLLVDAALLWLLQGPLGTLLPQGQPGLWLEGTLRLGGLWGLLKLSGLLG
FVGTLLPPLCLATPLTVSLRALVAGALRAPPARVASAPWSWLLVGYGAAGLSWSLWAVLS
PPGAQEKEQDQVNNNVLMWRLLKLSRPDLPLLVAAFFFLVLAVLGETLIPHYSGRVIDIL
GGDFDPHAFVSAIFFMCLFSFGSSLSAGCRGGCFTYTMSRINLRIREQLFSSLLRQDLGF
FQETKTGELNSRLSSDTTLMSNWLPLNANVLLRSVVKVVGLYGFMLSISPRLTLLSLLHM
PFTIAAEKVYNTRHQAVLREIQDAVARAGQVVREAIGGLQTVRSFGAEEHEVCRYKEALE
QCRQLYWRRDLERALYLLVRRVLHLGVQMLMLSCGLQQMQDGELTQGSLLSFMIYQESVG
SYVHTLVYIYGDMLSNVGAAEKVFSYMDRQPNLPSPGTLAPTTLQGIVKFQDVSFAYPNR
PDRPVLKGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQVLLDEKPISQYEHC
YLHSQVVSVGQEPVLFSGSVRSNIAYGLQSCEDDKVMAAAQAAHADDFIQEMEHGIYTDV
GEKGSQLAAGQKQRLAIARALVRDPRVLILDEATSALDVQCEQALQDWNSRGDRTVLVIA
HRLQTVQRAHQILVLQEGELQELAQLQEGQDLYSRLVQQRLMD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgccactccctgacctgagaccctggacctccctgctgctggtggacgcggctttactg
tggctgcttcagggccctctggggactttgcttcctcaagggcagccaggactatggctg
gaggggaccctgcggctgggagggctgtgggggctgctaaagctaagtgggctgctagga
tttgtggggacactgctgcccccgctctgtctggccacccccctgactgtatccctgaga
gccctggtggcgggggccttacgtgctcccccagccagagtcgcttcagccccttggagc
tggctgctggtggggtacggggctgcggggctcagctggtcactgtgggctgttctgagc
cctcctggagcccaggagaaggagcaggaccaggtgaacaacaacgttttgatgtggagg
ctgctgaagctctccaggccggacctgcctctccttgttgccgctttcttcttccttgtc
cttgctgttttgggtgagacattaatccctcactattctggtcgtgtgattgacatcttg
ggaggtgattttgacccccatgcctttgtcagtgccatcttcttcatgtgcctcttctcc
tttggcagctcactgtctgcaggctgccgaggaggctgcttcacctacaccatgtctaga
atcaacttgcggatccgggagcagcttttctcctccctgctgcgccaggacctcggtttc
ttccaggagactaagacaggggagctgaactcaaggctgagctcggataccaccctgatg
agtaactggcttcctttaaatgccaatgtgctcttgcgaagcgtggtgaaagtggtgggg
ctgtatggcttcatgctcagcatatcgccgcgactcaccctcctttctctgctgcacatg
cccttcacgatagcagccgagaaggtgtacaacacccgccatcaggcagtgcttcgggag
atccaggatgcagtggccagggcagggcaggtggtgcgggaggccattggagggctgcag
accgttcgcagttttggggctgaggagcatgaagtctgtcgctataaagaggcccttgaa
caatgccggcagctgtattggcggagagacctggaacgcgccttgtacctgctcgtaagg
agggtgctgcacttgggggtgcagatgctgatgctgagctgtgggctgcagcagatgcag
gatggggagctcacccagggcagcctgctttcctttatgatctaccaggagagcgtgggg
agctatgtgcataccctggtatacatatatggggatatgctcagcaacgtgggagctgcg
gagaaggttttctcctacatggaccgacagccaaatctgccttcacctggcacacttgcc
cccaccactctgcaggggattgtgaaattccaagatgtctcctttgcatatcccaatcgc
cccgacaggcctgtgctcaaggggctgacgttcaccctacgtcctggtgaggtgacggcg
ctggtgggacccaatgggtctgggaagagcacggtggctgccctgctgcagaatctgtac
cagcccacagggggacaggtgctgctggatgaaaagcccatctcacaatatgaacactgc
tacctgcacagccaggtggtttcagttgggcaggagcctgtgctgttctccggttctgtg
aggagcaacattgcatatgggctgcagagctgcgaagatgataaggtgatggcggctgcc
caggctgcccacgcagatgacttcatccaggaaatggagcatggaatatacacagatgta
ggggagaaggggagccagctggctgcaggacagaaacaacgtctggccattgcccgggcc
cttgtacgagacccacgggtcctcatcctggatgaggctactagtgccctggatgtgcag
tgcgagcaggctctgcaggactggaattctcgtggggatcgcacggtgctggtgattgct
cacaggctacagacagttcagcgcgcccaccagatcctggtgctccaggagggcgagctg
caggagcttgcccagctccaggagggacaggacctctattcccgcctggtgcagcagcgg
ctgatggactga
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