KEGG   Symphalangus syndactylus (siamang): 129473766
Entry
129473766         CDS       T10134                                 
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn03015  mRNA surveillance pathway
ssyn05134  Legionellosis
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129473766 (HBS1L)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05134 Legionellosis
    129473766 (HBS1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssyn03019]
    129473766 (HBS1L)
Messenger RNA biogenesis [BR:ssyn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     129473766 (HBS1L)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 AAA_22 DO-GTPase2
Other DBs
NCBI-GeneID: 129473766
NCBI-ProteinID: XP_055120626
LinkDB
Position
2:complement(112768561..112863001)
AA seq 684 aa
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED
LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDSVPDEILIEAVLKNKFDVQKALSGVL
EQDRVQSLKDKNEGTVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSGKKQTMGFEVPG
VSSEENGHSFHTPQKGPPIEDAIASSDVLEIASKSANLPHTIQASEEQSSTPAPVKKSSK
LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESK
KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAA
QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE
ITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPP
QRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTIKGITLHDEP
VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFPV
LLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFK
ELGRFMLRYGGSTIAAGVVTEIKE
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggcccggcatcggaatgttcgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcgccatcaacagctgctcagttt
atttattcacggcgtgacaaaccttccgttgagcctgtggaagaatatgattatgaagat
ctgaaagaatcttccaattctgtttcgaaccatcagctcagtggatttgatcaagctcgt
ctttattcatgccttgatcacatgagagaggtacttggagattctgtgccagatgaaata
ttaattgaagcagttctgaagaacaagtttgatgtgcagaaggccttgtcaggggttctg
gaacaagatagagtgcagagtttgaaggacaagaatgagggaacagtatctacaggaaag
atagcaaaaggaaaaccagtagattcccagacatcgcgaagtgaatctgaaattgtgcca
aaagttgctaaaatgaccgtatctggaaagaagcaaactatgggatttgaagtgcctgga
gtatcttctgaagaaaatggtcatagtttccacacacctcaaaaaggaccacccattgaa
gatgccattgcttcttctgatgttcttgagattgcttctaaatctgctaatctaccccac
acgattcaagcatcagaagagcagagttcaaccccagcaccggtgaaaaagtctagcaag
ctgaggcagcaaatagatgtgaaggcggaactggagaagcggcaaggagggaagcagctc
ctcaacttagtggtcattggtcatgttgatgctgggaaaagtactctgatgggccatatg
ctttatcttctgggtaatataaacaaaagaactatgcataagtatgaacaggagtctaaa
aaggctggcaaagcttcgtttgcatatgcatgggtcttggatgaaactggcgaagaaagg
gaaaggggagtaaccatggatgttggtatgacaaagtttgaaaccacaaccaaagttatt
acattaatggatgctccaggccataaggacttcattccaaatatgattacaggagcagcc
caggcggatgtagctgttttagttgtagatgccagcaggggagagtttgaagctggattt
gagactggaggacaaacacgagagcatggactcttggtccgttctctgggagtgacgcag
cttgctgttgcagttaataaaatggatcaggttaattggcaacaagaaagatttcaagag
attactggaaaacttgggcactttcttaagcaagcaggttttaaggagagtgatgtagct
tttattcctacaagtggtctcagtggtgaaaatctaatcacaagatctcagtcaagtgaa
ctcacaaaatggtataaaggactatgtttattagaacaaattgattcctttaagcctccc
cagcgatccattgacaagccttttagattatgtgtgtccgatgttttcaaagatcaagga
tctggattttgcataactggtaaaatagaagctggttatatccaaactggtgaccgacta
ctggcaatgcctcctaatgaaacttgtaccataaaaggaatcactctgcatgatgaacct
gtcgattgggcggcagcaggcgatcatgttagtcttactttggttgggatggatatcatc
aaaatcaatgttggctgcatattttgtggccccaaagtacccattaaagcttgcactcgt
ttcagagcccgaatcctcatctttaatattgaaattcctatcactaaaggatttcctgtg
ctgttacactaccaaactgtcagtgaacccgccgttattaaacgattgattagtgtctta
aacaaaagcacgggtgaagtcacaaagaaaaagcctaagtttttgactaaaggccagaat
gcattggtagagctacagacacaaagaccaatagctcttgagctatataaagactttaaa
gagctggggaggttcatgctacgttacggtggttctacaatagctgctggtgttgtcact
gagataaaagaatga

DBGET integrated database retrieval system