Symphalangus syndactylus (siamang): 129474073
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Entry
129474073 CDS
T10134
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04140
Autophagy - animal
ssyn04148
Efferocytosis
ssyn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129474073 (VPS16)
04148 Efferocytosis
129474073 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129474073 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129474073 (VPS16)
Membrane trafficking [BR:
ssyn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129474073 (VPS16)
Hops complex
129474073 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
129474073
NCBI-ProteinID:
XP_055120849
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All DBs
Position
24:44101374..44127786
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AA seq
871 aa
AA seq
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MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
SVRPVLDIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPVLQSAPSCW
AALCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPAASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHQPDMQKSLLRVGLDGRAGEGGAGRGWDGQ
QGSSLLSPSGSSQAASFGKCFLDRFPPDSFVHMCQDLRVLNAVRDYHIGIPLTYSQYKQL
TIQVLLDRLVLRRLYPLAIQICEYLRLPEVQGVSRILAHWACYKVQQKDVSDEDVARAIN
QKLGDTPGVSYSDIAARAYGCGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIES
GDTDLVFTVLLHLKNELNRGDFFMTLRNQPTALSLYRQFCKHQELETLKDLYNQDDNHQE
LGSFHIRASYAAEERIEGRVAALQTAADAFYKAKNEFAAKATEDQMRLLRLQRRLEDELG
GQFLDLSLHDTVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLTALADLEDWEELEKFSK
SKKSPIGYLPFVEICMKQHNKYEAKKYASRVGPEQKVKALLLVGDVAQAADVAIEHRNEA
ELSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcgaactggaacccacttggggactccgccttttaccggaaatat
gagctgtacagcatggactgggacctgaaggaggaactcagggattgcctggtggctgct
gcaccctatgggggccccattgcactgctgaggaacccctggcggaaggagaaagctgcc
agtgtgaggccagtgctcgatatatactctgcttccggcatgcctctggccagcctgctg
tggaagagtggacccgtggtgtccctgggctggtcagctgaggaggagctgctctgtgtg
caggaagatggtgctgtactggtttatgggcttcatggtgacttccggagacacttcagc
atgggcaatgaagtgctccagaaccgggttctggatgcccggatctttcacactgagttt
ggttctggagtggccatcctcacaggggcccaccgcttcaccctcagtgccaatgtgggt
gacctcaaactccgccggatgccagaggtgccagttctgcaaagtgcaccctcctgctgg
gctgcgctgtgccaggaccgagtggcacacattcttctggctgtggggcccgacctttac
ctcttggaccatgcagcctgctctgcagtgacgccccctggcctggccccaggagtaagc
agcttcctacagatggctgtctccttcacctaccgacacctggcactcttcacagacaca
ggctacatctggatggggacagcatcactcaaggagaagctatgtgagttcaactgcaac
atccgggcacctccaaagcagatggtctggtgcagccgtcctcgtagcaaggagagggcc
gtggtggtggcctgggaaaggcggctgatggtggtgggcgatgcacctgagagcatccag
tttgtgctggatgaggactcctacctggtgcctgagctcgatggggtccgcatcttctcc
cgcagcacccacgagttcctgcatgaggttccagcggccagcgaggagatcttcaaaatt
gcctcaatggcccccggggcgctgctcctggaggctcagaaggagtatgagaaagagagc
cagaaagcggatgagtacctgcgggagatccaggagctgggccagctgacccaggccgtg
cagcagtgcattgaggctgcaggacatgagcatcagccagacatgcagaagagtctgctc
agggttggcctggatggccgggctggggagggcggggctgggagggggtgggatggacag
cagggaagctctctcctatcgccctctggctcttctcaggccgcctccttcggtaagtgt
ttcctggacagatttccacccgacagctttgtgcacatgtgtcaggacctgcgtgtgctc
aatgctgttcgggactatcacatcgggatcccgctcacctatagccaatacaagcaactc
accatccaggtgctgctggacaggcttgtgttgcggagactttaccccctggccatccag
atatgcgagtacctgcgccttcctgaagtacagggcgtcagcaggatcctggcccactgg
gcctgctacaaggtgcaacagaaggatgtctcagatgaggatgtggctcgagccattaac
cagaagctgggggacacgcctggtgtctcttattccgacattgctgcacgagcctatggt
tgtggccgcacggagctggccatcaagctgctggagtatgagccacgctcaggggagcag
gtaccccttctcctaaagatgaagaggagcaaactggcactaagcaaggccatcgagagc
ggggacactgacctggtgttcacggtgttgctgcacctgaagaacgagctgaaccgagga
gattttttcatgacccttcggaatcagcccacggccctgagtttgtaccgacagttctgt
aagcatcaggagctagagacgctgaaggacctttataatcaggatgacaatcaccaggaa
ttgggcagcttccacatccgagccagctatgctgcagaagagcgtattgaggggcgagta
gcagctctgcagacagccgccgatgccttctacaaggccaagaatgaatttgcagccaag
gctacagaggatcaaatgcggctcctacggctgcagcggcgcctagaagatgagctgggg
ggccagttcctagacctgtctctacatgacacagttaccaccctcattcttggtggtcac
aacaagcgtgcagagcagctggcacgtgacttccgcatccctgacaagaggctctggtgg
ctgaagctgactgccctggcagatttggaagactgggaagagctagagaagttttccaag
agcaagaaatcacccattggctacctgccttttgtggagatctgcatgaaacaacacaac
aaatacgaagccaagaagtatgcttcccgcgtgggtcccgagcagaaggtcaaggctttg
cttcttgttggcgatgtggctcaggctgcagatgtggccatcgaacaccggaatgaggct
gagctgagcctcgtattgtcccactgcacgggagccacagatggggccacagctgacaag
attcaacgggccagggcacaagcccagaagaagtga
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