Symphalangus syndactylus (siamang): 129474342
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Entry
129474342 CDS
T10134
Symbol
CDK5RAP1
Name
(RefSeq) mitochondrial tRNA methylthiotransferase CDK5RAP1 isoform X1
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssyn03016
]
129474342 (CDK5RAP1)
Enzymes [BR:
ssyn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
129474342 (CDK5RAP1)
Transfer RNA biogenesis [BR:
ssyn03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
129474342 (CDK5RAP1)
Prokaryotic type
Methylthiotransferases
129474342 (CDK5RAP1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
129474342
NCBI-ProteinID:
XP_055121568
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Position
24:39144440..39184402
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AA seq
588 aa
AA seq
DB search
MTRPEVAAERKSLVYERSSGPVRGPDLPAELTLRNPGHCCCCGSPERQEDGARKDFSSRL
AAGPTFQHFLKSASAPQEKLSSEVEDPPPYLTLDELLGRQRKVYLETYGCQMNVNDTEIA
WSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLHQLKALKTRRPRSRVPLKIG
ILGCMAERLKEEILNREKTVDILAGPDAYRDLPRLLAVAESGQQAANVLLSLDETYADVM
PVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEEVKKLSEQGLKEVTL
LGQNVNSFRDNSEVQFNNAVPTNLSRGFTTNYKTKQGGLRFAHLLDQVSRVDPEMRIRFT
SPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMWRGYSREAYVELVHHIRESI
PGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMRQKTRAYHRLKDDVPEE
VKLRRLEELITVFREEATKANQTSVGCTQLVLVEGLSKRSATDLCGRNDGNLKVIFPDAE
MEDVNNPGLRVRAQPGDYVLVKITSASSQTLRGHVLCRTTLRDSSAYC
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgacccggcctgaagtagcggcggaacggaagtcgcttgtgtatgagcgcagcagcgga
ccagtgaggggacccgacttgccggcagaacttacgctgcggaaccccgggcactgttgc
tgctgcgggagtccagagagacaggaggatggagctcggaaggatttcagctccaggctg
gctgctggaccaacttttcaacattttttaaaaagtgcctcagctccccaggagaagctg
tcttcagaagtggaagacccacctccctatctcacgttggatgaacttcttggaaggcag
agaaaagtatacctcgagacctatggctgccagatgaatgtgaatgacacagagatagcc
tggtccatcttacagaagagtggctacctgcggaccagtaacctccaagaggcagatgtg
attctccttgtcacgtgctctatcagggagaaggctgagcagaccatctggaaccgttta
catcagcttaaagccttgaagacaaggcggccccgctcccgggttcctctgaagattgga
attctaggctgcatggctgagaggttgaaggaggagattctcaacagagagaaaacggta
gatattttggctggtcctgacgcctaccgggaccttcctcggctgctggctgttgctgag
tcgggccagcaagctgccaacgtgctgctctctctggacgagacctatgctgatgtcatg
ccagtccagacaagccccagtgccacatctgcctttgtgtcgatcatgcgaggctgtgac
aacatgtgtagctactgcattgttcctttcacccggggcagagagaggagtcggcctatt
gcctccattctagaggaagtgaagaagctttctgagcaggggctgaaagaagtgacactt
cttggtcagaatgttaatagttttcgggacaattcagaggtccagttcaacaatgcagtg
cctaccaatctcagccgtggctttaccaccaactataaaaccaagcaaggaggacttcgt
tttgctcatcttctggatcaggtctccagagtagatcctgaaatgaggatccgttttacc
tctccccaccccaaggattttcctgatgaggttctgcagctgattcatgagagagataac
atctgtaaacagatccacctgccagcccagagtggaagcagccgtgtgttggaggccatg
tggaggggatattcaagagaagcttatgtggagttagttcaccatattagagaatctatt
ccaggtgtgagcctcagcagcgacttcattgctggcttttgtggtgagacggaggaagat
cacgtccagacagtctctttgctccgggaagtgcagtacaacatgggcttcctctttgcc
tacagcatgagacagaagacacgggcatatcataggctgaaggatgatgtcccggaagag
gtaaaattaaggcgtttggaggaacttatcactgtcttccgagaagaagcaacaaaagcc
aatcagacctctgtgggctgtacccagttggtgctagtggaagggctcagtaaacgctct
gccactgacctgtgtggcaggaatgatggaaaccttaaggtgatcttccctgatgcagag
atggaggatgtcaataaccctgggctcagggtcagagcccagcctggggactacgtgctg
gtgaagatcacctcggccagctctcagacacttaggggacatgttctctgcaggaccact
ctgagggactcctctgcatattgctga
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