Symphalangus syndactylus (siamang): 129474792
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Entry
129474792 CDS
T10134
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129474792 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssyn03041
]
129474792 (PRPF6)
Spliceosome [BR:
ssyn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129474792 (PRPF6)
Complex C
U5 SnRNP specific factors
129474792 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_16
TPR_17
TPR_2
TPR_8
ARM_TT21_2nd
TPR_1
TPR_CcmH_CycH
ARM_TT21_C
T7SS_EccA1_N
ChAPs
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
129474792
NCBI-ProteinID:
XP_055122463
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All DBs
Position
24:complement(8541671..8592181)
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AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYER
ARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEE
QKEMMERAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHD
PHVLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
CESAEPRHGELWCAVSKDIANWQKKIGDILRLVAGRIKNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaagaaaccgttcctggggatgcctgcgccgctcggctacgtgccgggg
ctgggccggggcgccactggcttcaccacgcggtcagacattgggcccgcccgtgatgca
aatgaccctgtggatgatcgccatgcacccccaggcaagagaaccgttggggaccagatg
aagaaaaaccaggctgctgatgatgacgacgaggatctaaatgacaccaattacgatgag
tttaatggctatgctgggagcctcttctcaagtggaccctatgagaaagatgatgaggaa
gcagatgctatttatgcagccctggataaaaggatggatgaaagaagaaaagaaagacgg
gagcaaagggagaaagaagaaatagagaaatatcgtatggaacgccccaaaatccaacag
cagttctcagacctcaagaggaagttggcggaagtcacggaagaagagtggctgagcatc
cctgaggttggcgatgccagaaacaagcgccagcggaacccacgctatgagaagctgacc
cctgttcccgacagcttctttgccaaacatttacagaccggagagaaccatacctcagtg
gatccccgacaaactcaatttggaggtcttaacacaccctatccaggtggactaaacact
ccatacccaggtggaatgacaccaggattgatgacacctggcactggtgagctggacatg
aggaagattggccaagcgaggaacactctgatggacatgaggctgagtcaggtgtctgac
tccgtgagtggacagaccgtcgttgaccccaaaggctacctgacggatttaaattccatg
atcccgacacacggaggagacatcaatgatatcaagaaggcgcgactgctcctcaagtct
gttcgggagacgaaccctcatcacccgccagcctggattgcgtcagcccgcctggaagaa
gtcactgggaagctacaagtagctcggaaccttatcatgaaggggacagagatgtgcccc
aagagtgaagatgtctggctggaagcagccaggttgcagcctggggacacagccaaggcc
gtggtagcccaagctgtccgtcatctcccacagtctgtcaggatttacatcagagcagca
gagctggaaacggacattcgtgcaaagaagcgggttcttcggaaagccctcgagcatgtt
ccaaactcggttcgcttgtggaaagcagctgttgaactggaagagcctgaagacgctaga
atcatgctgagccgagctgtggagtgctgccccaccagtgtggagctctggcttgctctg
gcaaggctggagacctatgaaaatgcccgcaaggtcttgaacaaggcgcgggagaacatt
cctacagaccgacatatctggatcacggctgctaagctggaggaagccaatgggaacacg
cagatggtagagaagatcatcgaccgagccatcacctctctgcgggccaacggtgtggag
atcaaccgcgagcagtggatccaggatgccgaggaatgtgacagggctgggagtgtggcc
acctgccaggccgtcatgcgtgccgtgattgggattgggattgaggaggaagatcggaag
catacctggatggaggatgctgacagttgtgtagcccacaatgccctggagtgtgcacga
gccatctacgcctacgccctgcaggtgttccccagcaagaagagtgtgtggctgcgtgcc
gcgtacttcgagaagaaccatggcactcgggagtccctggaagcactcctgcagagggct
gtggcccactgccccaaagcggaggtgctgtggctcatgggcgccaagtccaagtggctg
gcaggggatgtgcccgcagcaaggagcatcctggccctggccttccaggccaaccccaac
agtgaggagatatggctggcagccgtgaagctggagtccgagaatgatgagtacgagcgg
gcccggaggctgctggccaaggcgcggagcagtgcccccaccgcccgggtgttcatgaag
tctgtgaagctggagtgggtgcaagacaacatcagggcagcccaggatctgtgcgaggag
gccctgcggcactatgaggacttccccaagctgtggatgatgaaggggcagatcgaggag
cagaaggagatgatggagagggcgcgggaagcctataaccaggggttgaagaagtgtccc
cactccacacccctgtggcttttgctgtctcggctggaggagaagattgggcagcttact
cgggcacgggccattttggaaaagtctcgtctgaagaacccaaagaaccctgggctgtgg
ttggagtccgtgcggctggagtaccgtgcagggctgaagaacatcgcaaatacgctcatg
gccaaggcgctgcaggagtgccctaactccggtatcctgtggtctgaggccatcttcctc
gaggcgaggccccagaggaggaccaagagcgtggatgccctgaagaagtgtgagcatgac
ccccacgtgctcctggccgtggccaagctgttttggagtcagcggaagatcaccaaggcc
agggagtggttccaccgtactgtgaagattgactcggacctgggggatgcctgggccttc
ttctacaagtttgagctgcagcatggcactgaggagcagcaggaggaggtgaggaagcgc
tgtgagagtgcagagcctcggcatggggagctgtggtgcgccgtgtccaaggacattgcc
aactggcagaagaagatcggggacatccttaggctggtggccggccgcatcaagaacacc
ttctga
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