KEGG   Symphalangus syndactylus (siamang): 129474877
Entry
129474877         CDS       T10134                                 
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129474877 (CSTF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssyn03019]
    129474877 (CSTF1)
Messenger RNA biogenesis [BR:ssyn03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     129474877 (CSTF1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WDR55 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd CSTF1_dimer WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 VPS8_N Ge1_WD40 Frtz Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_SPT8
Other DBs
NCBI-GeneID: 129474877
NCBI-ProteinID: XP_055122706
LinkDB
Position
24:complement(16121368..16133335)
AA seq 431 aa
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTF
EKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAV
FNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRSTTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtacagaaccaaagtgggcttgaaggaccgccagcagctctacaagctgatcattagc
cagctgctatatgacggctacatcagcattgccaatgggctcatcaatgaaatcaagcct
cagtctgtgtgtgcaccctcggagcagctcctgcatctcatcaaactaggaatggaaaat
gatgacaccgcagttcagtatgcaattggtcgttcagatactgttgcccctggcacaggg
attgacctggaatttgatgcagatgttcagactatgtccccagaggcttctgagtacgaa
acgtgctatgtcacgtcacataaaggaccgtgccgtgtagctacctatagtagagatgga
cagttaatagctactgggtctgctgatgcttcaataaagatacttgacacagagaggatg
ttggccaaaagtgccatgccaatagaggtcatgatgaatgagactgcacaacaaaatatg
gaaaatcacccagtgattcgaactctttatgaccatgtagatgaagtcacatgccttgct
ttccacccaacagaacagatcctggcttctggttcaagggattatactcttaaattattt
gattattccaaaccatcagcaaaaagagccttcaaatacattcaggaagctgaaatgtta
cgctccatctcttttcatccttctggagactttatacttgtcggaactcagcatcctact
cttcgcctttatgatatcaacacctttcaatgttttgtctcttgcaatcctcaagatcaa
cacaccgatgctatctgttccgttaattacaattctagtgccaatatgtacgtaactgga
agcaaggacggctgcatcaaattatgggatggtgtttcaaatcgatgcatcacaactttt
gagaaagcacacgacggtgctgaagtttgttctgccattttttccaaaaattctaaatac
attctctcaagtggaaaagactctgtagctaaactttgggaaatatcaacaggacgaaca
ctggtcagatacacgggcgcgggtttaagtggacgccaggtgcaccggacacaggctgtg
tttaaccacaccgaggactatgtgttgctgcccgacgagaggacgatcagtctttgctgc
tgggactcgaggacagccgagcggagaaacctgctgtcattggggcacaacaacattgta
cgctgcatagtgcactcccccaccaaccccgggttcatgacgtgcagcgatgacttcaga
gcgcggttttggtaccggagatcaaccaccgactga

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