Symphalangus syndactylus (siamang): 129475952
Help
Entry
129475952 CDS
T10134
Name
(RefSeq) nuclear RNA export factor 2 isoform X1
KO
K14284
nuclear RNA export factor
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03008
Ribosome biogenesis in eukaryotes
ssyn03013
Nucleocytoplasmic transport
ssyn03015
mRNA surveillance pathway
ssyn05014
Amyotrophic lateral sclerosis
ssyn05164
Influenza A
ssyn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129475952
03015 mRNA surveillance pathway
129475952
03008 Ribosome biogenesis in eukaryotes
129475952
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
129475952
05168 Herpes simplex virus 1 infection
129475952
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129475952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyn03019
]
129475952
03009 Ribosome biogenesis [BR:
ssyn03009
]
129475952
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129475952
mRNA cycle factors
Stress granule specific factors
129475952
Ribosome biogenesis [BR:
ssyn03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
129475952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
NTF2
TAP_C
LRR_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
129475952
NCBI-ProteinID:
XP_063491269
LinkDB
All DBs
Position
X:complement(106563335..106612996)
Genome browser
AA seq
657 aa
AA seq
DB search
MLADLVSAFPSSFCETLASGQSNNKMCSTLKKRGTYRTEAAECHDRGSTFQGRKKGGSSF
RDNFDGRNCHYEHGGYERPPSHCQENDGSMEMRDVHKDQQLRHTPYSIRRERGMKWHSED
EIRFTTWRNTKPPKRKMKQNTQDGYTRNWFKVTIPYGIKYDKAWLMNSIRSHCSDPFTPV
DFHYVRNRACFFVQDASAASALKDVSYKICDDENQKICIFVNHSTAPYSVKNKLKPGQME
MLKLTMNKRYNVSQQALDLQNLRFDPDLMGRDIDIILNRRNCMAATLKIIERNFPELLSL
NLCNNKLYQLDGLSDIIEKAPKVKTLNLSKNKLESVWELGKVKGLKLKELWLEGNPLCNT
FSDQCAYVSAIRDCFPKLLRLDGRELSAPVVVDIDSSETMKPCKQNFTGSETLKHLVLQF
LQQYYSIYDSGDRQGLLGAYHNEACFSLAIPFDPKDSAPNSLCKYFEDSRNMKALKDPYL
KGELLRRTKRDIVDSLSALPKTHHDLSSFLVDLWCQTERMLCFSVNGVFKEVEGQSQGSV
LAFTRTFIATPGSSSSLCIVNDELFVRDASPQETQSAFFIPVSTLSSNSEPSLSQEQQEM
VQAFSAQSGMKLEWSQKPRARSPRRPSSKSPERSPSMSSLSSFTSSLFPLFTSLRPG
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgatttggtgtctgcatttccaagttcgttctgtgagactctagcgtcagga
caaagcaacaacaaaatgtgctctactctaaagaagcgtgggacatacagaactgaagct
gcagaatgccatgaccgtggtagcacttttcaaggaagaaagaaaggtgggagttctttc
cgggataattttgacgggaggaactgtcattatgaacatggtgggtatgagcgcccgcct
tcacactgccaggagaatgatggaagcatggagatgagggatgtccacaaggaccaacaa
ctaagacacactccttatagcatccgacgcgaaagaggaatgaaatggcatagtgaagac
gaaatccgttttaccacgtggagaaatacaaaacctccaaagagaaaaatgaagcagaac
acacaggatggatacacaaggaactggttcaaggtcacaattccttacgggataaagtat
gacaaggcatggctaatgaattcaatccggagccattgcagtgaccccttcactccggtt
gatttccactacgtccgaaatcgggcatgcttctttgtccaggatgctagtgctgcctcc
gcattgaaggatgtcagttataagatttgtgatgacgagaaccaaaagatatgtatattt
gtcaatcattctactgcgccctactctgtgaagaataagttgaagccaggccaaatggag
atgctaaagctgaccatgaacaaacggtacaatgtctcccagcaagctcttgatctccag
aatctccgctttgacccagacttgatgggccgtgacattgatataatcctgaatcgaaga
aactgcatggctgccaccctgaagatcattgaaagaaatttccctgagctgttgtctttg
aacttgtgcaacaacaaactgtaccagctggatggcctttccgacattatagagaaggct
cccaaagtcaagaccctgaacctctccaaaaataagctggagtcggtgtgggagttgggc
aaggtgaaagggctgaagctcaaagagctatggctagaagggaaccccttgtgcaacacc
ttctcggaccagtgcgcctatgtaagtgccatccgggattgtttccccaagttgttacgc
ctggacggccgagagttatccgcaccagtggttgttgacattgacagctctgagacgatg
aaaccctgcaagcaaaactttactggatctgagaccctaaagcacttagtcctgcaattc
ctgcagcagtattactcgatctatgactctggagatcgacagggtctcctcggtgcttac
cacaatgaggcctgcttctccttggctattcccttcgaccccaaggactcagccccgaac
agcttgtgcaagtactttgaggatagcaggaatatgaaagcactcaaggacccctacctg
aagggggaactgctgaggcgcacaaaacgtgacattgtggactccctcagtgcgttgccc
aaaactcatcatgacctcagctccttcctggtggacctgtggtgccagacggaacggatg
ctctgcttttctgtcaatggggttttcaaggaagtggaaggacagtctcagggttctgtt
ctcgccttcacccggaccttcattgctacccctggcagcagttccagtctgtgcatcgtg
aatgacgagctgtttgtgagggatgccagcccccaggagactcagagtgccttcttcatc
ccagtgtccacactctcctccaactctgagccctccctctcccaggagcagcaggaaatg
gtgcaggctttctctgcccagtctgggatgaaactggagtggtctcagaaaccgagggca
agatccccgcggaggccttcaagcaaatctcctgagaggagcccttcgatgtcttctttg
tcttcgttcacatcctctttgtttcctcttttcaccagcctaaggcctggctga
DBGET
integrated database retrieval system
