KEGG   Symphalangus syndactylus (siamang): 129476674
Entry
129476674         CDS       T10134                                 
Symbol
KDM5D
Name
(RefSeq) lysine-specific demethylase 5D isoform X2
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ssyn  Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ssyn01009]
    129476674 (KDM5D)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssyn03036]
    129476674 (KDM5D)
Enzymes [BR:ssyn01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     129476674 (KDM5D)
Protein phosphatases and associated proteins [BR:ssyn01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     129476674 (KDM5D)
Chromosome and associated proteins [BR:ssyn03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    129476674 (KDM5D)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD PHD_ash2p_like
Other DBs
NCBI-GeneID: 129476674
NCBI-ProteinID: XP_055125521
LinkDB
Position
Y:23439810..23479966
AA seq 1539 aa
MEPGCDEFLPPPECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERKILDLYSLSKIVI
EEGGYEAICKDRRWARVAQRLHYPPGKNIGSLLRSHYERIIYPYEMFQSGANHVQCNTQP
FDNEVKDKEYKPHSIPLRQSVQPSKFSSYSRRAKRLQPDPEPTEEDIEKNPELKKLQIYG
PGPKMMGLGLMAKDKDKTVHKKVTCPPTVTVKDERSRGGNVSSTLLKQHLSPEPCTKTTM
QLRKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPK
CILVECKQPPEAFGFEQATQEYTLQSFGEMADSFKSDYFNMPVHMVPTEVVEKEFWRLVS
SIEEDVTVEYGADIHSKEFGSGFPVSNSKRNLSPEEKEYATSGWNLNVMPVLDQSVLCHI
NADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK
RLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYN
FAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHKEM
FIMVQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVC
LSHINDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDAWANKVRVALEVEDGRKRS
FEELRALESEARERRFPNSELLQRLKNCLSEVEACISQVLGLVSGQVARMDTPQLTLTEL
RVLLEQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALATLPSSPGLLQSLLERGQQLGV
EVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMRGLLVMGAKIASSPSVDKARAEL
QELLTIAERWEEKAHFCLEARQKHPPTTLEAIIRETENIPVHLPNIQALKEALTKAQAWI
ADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEQLRQLELQVLTAHSWREKASKTFLKKN
SCYTLLEVLCPCADTGSDSTKRSRWREKALGLYQCDTELLGLSAQDLRDPGSVVVAFKEG
EQKEKEGILQLRRTNSAKPSPLAPSLMASSPTSICVCGQVPAGVGALQCDLCQDWFHGQC
VSVPHLLTSPKPSLTSSSLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLP
EGEALQCLTERAIGWQDRARKALASEEVTALLQQLAELRQQLQAKPRPEEASVYTSATTC
DPIREGSGNTISKVQGLLENGDSVTSPENIAPGKGSDLELLSSLLPQLTGPVLELPEAIR
APLEELMMEGDLLEVTLDENHSIWQLLQAGQPPDLDRIHTLLELEKLEHQGSRTRSRALE
RRRRRQKVDQGRKVEDLVQQELQSKRARSSGIISQVGREEEHYQEKADGENMFLTPSTDH
SPFLKGNQNSLQHKDSGSSAACPSLMPLLQLSCSDEQEL
NT seq 4620 nt   +upstreamnt  +downstreamnt
atggaaccggggtgtgacgagttcctgccgccgcccgagtgcccggtttttgagcctagc
tgggctgaattccaagacccgctaggctacattgcgaaaataaggcctatagcagagaag
tctggcatctgcaaaatccgcccacccgcggactggcagcctccttttgcagtagaagtt
gacaatttcagatttactcctcgcatccaaaggctaaatgaactggaggcccagactaga
gtgaaattgaactatttggatcagattgcaaaattctgggaaattcaaggctcctcatta
aagattcccaatgtggagcggaagatcttggacctctacagccttagtaagatcgtgata
gaggaaggtggctatgaagccatctgcaaggatcgtcggtgggctcgagttgcccagcgt
ctccactacccaccaggcaaaaacattggctccctgctacgatcacattatgaacgcatt
atttacccctatgaaatgtttcagtctggagccaaccatgtgcagtgtaacacacaaccg
tttgacaatgaggtaaaagataaggaatacaagccccacagcatccctcttagacagtct
gtgcaaccttcaaagttcagcagctacagtcgacgggcaaaaaggctacagcctgatcca
gagcctacagaggaggacattgagaagaatccagagctaaaaaagttacagatctatggg
ccaggtcccaaaatgatgggcttgggccttatggctaaggacaaggataagactgtgcat
aagaaagtcacatgccctccaactgttacggtgaaggatgagcgaagtcgaggtgggaac
gtgtcatcaacattgctcaagcagcacttgagcccggagccctgcactaagacgacgatg
cagctacgaaagaatcacagcagtgcccagtttatcgactcatatatttgccaggtgtgc
tcccgtggggatgaagatgataagcttcttttctgtgatggctgtgatgacaattaccac
atcttctgcttgttaccaccccttcctgaaatccccagaggcatctggaggtgcccaaaa
tgtatcttggtggagtgtaaacagcctcctgaagcttttggatttgaacaggctacccag
gagtacactttgcaaagttttggtgaaatggctgattccttcaagtccgactacttcaac
atgcctgtacatatggtgcctacagaagttgtagagaaggaattctggaggctggtgagc
agcattgaggaagatgtgacagttgaatatggagctgatattcattccaaagaatttggc
agtggctttcctgtcagcaatagcaaacgaaacttatctcctgaggagaaggagtatgcg
accagtggttggaacctgaatgtgatgccggtgctagatcagtctgttctctgtcacatc
aatgcggacatctcaggcatgaaggtgccctggctgtacgtgggcatggttttctcagca
ttttgttggcatattgaggatcactggagttactctattaactatctgcattggggtgag
ccgaagacctggtatggtgtaccctccctggcagcagagcatttggaggaggtgatgaag
aggctgacacctgagctgtttgatagccagcctgatctcctacaccagcttgtcactctc
atgaatcccaacactttgatgtcccatggtgtgccagttgtccgcacaaaccagtgtgca
ggggaatttgtcatcacttttcctcgtgcttaccacagtggttttaaccaaggctacaat
ttcgctgaagctgtcaacttttgcactgctgactggctacctgctggacgccagtgcatt
gaacactatcgccggctccggcgctattgtgtcttctcccacgaggagctcatctgcaag
atggctgccttcccagagacgttggatctcaatctagcagtagctgtgcacaaggagatg
ttcattatggttcaggaggagcgacgtctacgaaaggcccttttggagaagggcgtcacg
gaggctgagcgagaggcttttgagctgctcccagatgatgaacgccagtgtatcaagtgc
aagactacatgcttcttgtcagccctggcctgctacgactgcccagatggccttgtatgc
ctttcccacatcaacgacctctgcaagtgctctagtagccgacagtacttacggtatcgg
tacaccttggatgagctccccaccatgctgcataaactgaagattcgggctgagtctttt
gacgcctgggccaacaaagtgcgagtggccttggaggtggaggatggtcgtaagcgcagc
tttgaagagctaagggccctggagtctgaggctcgtgagaggaggtttcctaatagtgag
ctacttcagcgactgaagaactgcctgagtgaggtggaggcttgtatttctcaagtcctg
gggctggtcagtggtcaggtggccaggatggacactccacagctgaccttgactgaactc
cgggtccttcttgagcaaatgggcagcctaccctgtgccatgcatcagattggggatgtc
aaggatgtcctggaacaggtggaggcctatcaagctgaggctcgtgaggctctggccaca
ctgccctctagtccagggctattgcagtccctgttggagagggggcagcagctgggtgta
gaagtgcctgaagcccatcagcttcagcagcaggtggagcaggcgcaatggctagatgaa
gtgaagcaggccctggccccttctgctcacaggggctctctggtcatcatgcgggggctt
ttggttatgggtgccaagatagcctccagcccttctgtggacaaggcccgggctgagctg
caagaactgctgaccattgcagagcgctgggaagaaaaggctcatttctgcctggaggca
aggcaaaaacatccaccaaccacattggaagccataattcgtgagacagaaaacatccct
gttcacctgcctaacatccaggctctcaaagaagctctgactaaggcacaagcttggatt
gctgatgtggatgagatccaaaatggtgaccactacccctgtctggatgacttggagggc
ctggtggctgtgggccgggacctgcctgtggggctggaacagctgagacagctagagctg
caggtattgacagcacattcctggagagagaaggcctccaagacctttctcaagaagaat
tcttgctacacactgcttgaggtgctttgcccatgtgcggacactggctcagacagcacc
aagcgtagccggtggagggagaaggcgctggggttgtaccaatgtgacacagagctgctg
gggctgtctgcacaggacctcagagacccaggctctgtggttgtggccttcaaggaaggg
gaacagaaggagaaggagggtatcctgcagctgcgtcgcaccaactctgccaagcccagt
ccactggcaccatccctcatggcctcttctccgacttctatctgtgtgtgtgggcaggtg
ccagctggggtgggagctctgcagtgtgacttgtgtcaggactggttccatgggcagtgt
gtgtcagtaccccatctcctcacctctccaaagcccagtctcacttcatcttcactgcta
gcctggtgggaatgggacacaaaattcctgtgtccactgtgtatgcgctcacgacggcca
cgcctagagacaatcctagccttgctggttgccctgcagaggctgcctgtgcggctgcct
gagggtgaggcccttcagtgtctcacagagagggccattggctggcaagaccgtgccaga
aaggctctggcctctgaggaagtgactgctctgttgcaacagctagctgagcttcgccaa
cagctacaggccaaacccagaccagaggaggcctcagtctacacttcagccactacctgt
gaccctatcagagaaggcagtggcaacactatttctaaggtccaagggctgctagagaat
ggagacagtgtgaccagtcctgagaacatagcaccaggaaagggctctgacctggagcta
ctgtcctcactgttgccgcagttgactggccctgtgttggagctgcctgaggcaatccgg
gctccgctggaggagctcatgatggaaggggacctgcttgaggtgaccctggatgagaac
cacagcatctggcagctgctgcaggctggacagcctccagacctggacagaattcacaca
ctcctggagctggaaaagcttgaacatcaagggagtcgaacaaggagccgggctctggag
aggcgacggcggcggcagaaggtggatcaaggtagaaaggttgaggatcttgttcaacag
gagcttcagtcaaaaagggctcggagctcagggattatatctcaggtgggccgagaagag
gaacattatcaggagaaagcagatggtgaaaatatgttcctgacaccttccacagaccac
agccctttcttgaaaggaaaccaaaatagcctacaacacaaggattcaggctcctcagct
gcttgtccttctttaatgcctttgctacaactctcctgctctgatgagcaagagttgtga

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