Symphalangus syndactylus (siamang): 129476903
Help
Entry
129476903 CDS
T10134
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04340
Hedgehog signaling pathway
ssyn04360
Axon guidance
ssyn05200
Pathways in cancer
ssyn05205
Proteoglycans in cancer
ssyn05217
Basal cell carcinoma
ssyn05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129476903 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
129476903 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129476903 (SHH)
05205 Proteoglycans in cancer
129476903 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
129476903 (SHH)
05217 Basal cell carcinoma
129476903 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssyn01002
]
129476903 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ssyn00536
]
129476903 (SHH)
Peptidases and inhibitors [BR:
ssyn01002
]
Cysteine peptidases
Family C46: hedgehog family
129476903 (SHH)
Glycosaminoglycan binding proteins [BR:
ssyn00536
]
Heparan sulfate / Heparin
Morphogens
129476903 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
129476903
NCBI-ProteinID:
XP_055125721
LinkDB
All DBs
Position
6:complement(145307343..145319639)
Genome browser
AA seq
465 aa
AA seq
DB search
MGEMLLLARCLLLVLVSSLLVCSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDQGRLLYSD
FLTFLDRDDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSAAGEPEASSGSGPPSGG
ALGPRALFASRVRPGQRVYVVAERDGDRRLLPAAVHSVTLREEAAGAYAPLTAQGTILIN
RVLASCYAVIEEHSWAHRAFAPFRLAHALLAALAPARTDRGGDSGGGDRGGGGGRVPLPA
PGAADAPGAGATAGIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagatgctgctgctggcgagatgtctgctgctagtcctcgtctcctcgctgctg
gtgtgctcgggactggcgtgcggaccgggcagggggttcgggaagaggaggcaccccaaa
aagctgacccctttagcctacaagcagtttatccccaatgtggccgagaagaccctaggc
gccagcggaaggtatgaagggaagatctccagaaactccgagcgatttaaggaactcacc
cccaattacaaccccgacatcatatttaaggatgaagaaaacaccggagcggacaggctg
atgactcagaggtgtaaggacaagttgaacgctttggccatctcggtgatgaaccagtgg
ccaggagtgaaactgcgggtgaccgagggctgggacgaagatggccaccactcagaggag
tctctgcactacgagggccgcgcagtggacatcaccacgtccgaccgcgaccgcagcaag
tacggcatgctggcccgcctggccgtggaggccggcttcgactgggtgtactacgagtcc
aaggcgcacatccactgctcggtgaaagcagagaactcggtggcggccaaatccggaggc
tgcttcccgggctcggccacggtgcacctggagcagggcggcaccaagctggtgaaggac
ctgcgccccggggaccgcgtgctggcggcggacgaccagggccggctgctctacagcgac
ttcctcactttcctggaccgcgacgacggcgccaagaaggtcttctacgtgatcgagacg
cgggagccgcgcgagcgcctgctgctcaccgccgcgcacctgctgtttgtggcgccgcac
aacgactcggccgccggggagcccgaggcgtcctcaggctctgggccgccctccgggggc
gcactggggcctcgagcgctgttcgccagccgcgtgcgcccgggccagcgcgtgtacgtg
gtggccgagcgcgacggggaccgccggctcctgcccgccgctgtgcacagcgtgacccta
cgcgaggaggccgcgggcgcctacgcgccgctcacggcccagggcaccatcctcatcaac
cgggtgctggcctcgtgctacgccgtcatcgaggagcacagctgggcgcaccgcgccttc
gcgcccttccgcctggcgcacgcgctcctggctgcactggcgcccgcgcgcacggaccgc
ggcggggacagcggcggcggggaccgcgggggcggcggcggcagagtacccctgcccgcg
cctggtgcggccgacgctccgggtgcgggggccaccgcgggcatccactggtactcgcag
ctgctctaccaaataggcacctggctcctggacagcgaggccctgcacccgctgggcatg
gcggtcaagtccagctga
DBGET
integrated database retrieval system
