KEGG   Symphalangus syndactylus (siamang): 129478603
Entry
129478603         CDS       T10134                                 
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
  KO
K04849  voltage-dependent calcium channel N type alpha-1B
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn04010  MAPK signaling pathway
ssyn04020  Calcium signaling pathway
ssyn04721  Synaptic vesicle cycle
ssyn04723  Retrograde endocannabinoid signaling
ssyn04725  Cholinergic synapse
ssyn04726  Serotonergic synapse
ssyn04727  GABAergic synapse
ssyn04728  Dopaminergic synapse
ssyn04930  Type II diabetes mellitus
ssyn05016  Huntington disease
ssyn05020  Prion disease
ssyn05022  Pathways of neurodegeneration - multiple diseases
ssyn05032  Morphine addiction
ssyn05033  Nicotine addiction
ssyn05207  Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    129478603 (CACNA1B)
   04020 Calcium signaling pathway
    129478603 (CACNA1B)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    129478603 (CACNA1B)
   04725 Cholinergic synapse
    129478603 (CACNA1B)
   04728 Dopaminergic synapse
    129478603 (CACNA1B)
   04726 Serotonergic synapse
    129478603 (CACNA1B)
   04723 Retrograde endocannabinoid signaling
    129478603 (CACNA1B)
   04721 Synaptic vesicle cycle
    129478603 (CACNA1B)
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    129478603 (CACNA1B)
  09164 Neurodegenerative disease
   05016 Huntington disease
    129478603 (CACNA1B)
   05020 Prion disease
    129478603 (CACNA1B)
   05022 Pathways of neurodegeneration - multiple diseases
    129478603 (CACNA1B)
  09165 Substance dependence
   05032 Morphine addiction
    129478603 (CACNA1B)
   05033 Nicotine addiction
    129478603 (CACNA1B)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    129478603 (CACNA1B)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssyn04040]
    129478603 (CACNA1B)
Ion channels [BR:ssyn04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   129478603 (CACNA1B)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel Phage_TAC_15
Other DBs
NCBI-GeneID: 129478603
NCBI-ProteinID: XP_055126087
LinkDB
Position
3:complement(6718154..6961986)
AA seq 2357 aa
MVRFGDELGGRYGGPGGGERARGGGAGGAGGPGPGGLQPGQRVLYKQSIAQRARTMALYN
PIPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPD
GDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILA
TAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYMGKFHKACFPNSTDAEPVGDFPCGKEAPARLCEGDTECREYWPGPNFGITNFDNI
LFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFA
KERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDRNAEEKSPLDAVLKRA
ATKKSRNDLIHAEEGEDRFADLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRMV
KAQSFYWVVLCVVALNTLCVAMVHYNQPRRLTTALYFAEFVFLGLFLTEMSLKMYGLGPR
SYFRSSFNCFDFGVIVGSVFEVVWAAIKPGSSFGISVLRALRLLRIFKVTKYWSSLRNLV
VSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQI
LTGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELT
KDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAAFVKQARGTVSRSSSVSSVNSPRQ
QNSAKARSVWEQRASQLRLQNLRASCEALYSEMDPEERLRFATTRHLRPDMKTHLDRPLV
VELGRDGARGPVGGKARPEAAEAPEGVDPPRRHHRHRDKDKTPAAGDQDRAEAPKAESGE
PGAREERPRPHRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRGSPEEAAEREPRRHRAH
RHQDPGKECAGAKGERRARHRGGPRAGAREAESGEEPARRHRARHKAQPAQEAVEKEATE
KEAEIVEADKERELRNHQPREPHCDLETGGTVTVGPMHTLPSTCLQKVEEQPEDADNQRN
VTRMGSQPPDPNTVVHIPVMLTGPPGEATVVPSGNVDLESQAEGKKEVEADDVMRSGPRP
IVPYSSMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSPRNNAL
KYLDYIFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFVGGS
KGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVI
AVQLFKGKFFYCTDESKELERDCRGQYLDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLF
TVSTGEGWPMVLKHSVDATYEEQGPSPGYRMELSIFYVVYFVVFPFFFVNIFVALIIITF
QEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNRQSFQYKTWTFVVSPPFEYFIMA
MIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFD
FVTVLGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPY
VCLLIAMLFFIYAIIGMQVFGNIALDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIM
LSCLSNQACDEQANATECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSIL
GPHHLDEFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMP
ISNEDMTVHFTSTLMALIRTALEIKLAPAGTKQHQCDAELRKEISVVWANLPQKTLDLLV
PPHKPDEMTVGKVYAALMIFDFYKQNKTTRDQMQQAPGGLSQMGPVSLFHPLKATLEQTQ
PAVLRGARVFLRQKSSTSLSNGGAIQNQESGIKESVSWGTQRTQDAPHEARPPLERGHST
EIPVGQSGALAVDVQMQSITRRGPDGEPQPGLESQGRAASMPRLAAETQPVTDVSPMKRS
ISTLAQRPRGTHLCSTTPDRPPPSQAPHHHHHRCHRRRDRKQRSLEKGPSLSADTDGAPS
SAAGPGLPPGEGPTGCRRERERRQERGRSQERRQPSSSSSEKQRFYSCDRFGGREPPKPK
PSLSSHPTSPTAGQEPGPHPQGSGSVNGSPLLSTSGASTPGRGGRRQLPQTPLTPRPSIT
YKTANSSPVHFAGAQTSLPTFSPGRLSRGLSEHNALLQRDPLSQPLAPGSRIGSDPYLGQ
RLDSEASVHALPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSS
GGRARHSYHHPDQDHWC
NT seq 7074 nt   +upstreamnt  +downstreamnt
atggtccgcttcggggacgagctgggcggccgctatgggggccccggcggcggggagcgg
gcccggggcggcggggccggcggggcagggggcccgggccccggggggctgcagcccggc
cagcgggtcctctacaagcaatcgatcgcgcagcgcgcgcggaccatggcgctgtacaac
cccatcccggtcaagcagaactgcttcaccgtcaaccgctcgctcttcgtcttcagcgag
gacaacgtcgtccgcaaatacgcgaagcgcatcaccgagtggcctccgttcgagtacatg
atcctggccaccatcatcgccaactgcatcgtgctggccctggagcagcacctccctgat
ggggacaaaacgcccatgtccgagcggctggacgacacggagccctatttcatcgggatc
ttttgcttcgaggcagggatcaaaatcatcgctctgggcttcgtcttccacaagggctct
tacctgcggaatggctggaacgtcatggacttcgtggtcgtcctcacagggatccttgcc
acggctggaactgacttcgacctgagaacactgagggctgtgcgtgtgctgaggcccctg
aagctggtgtctgggattccaagtttgcaggtggtgctcaagtccatcatgaaggccatg
gttccactcctgcagatcgggctgcttctcttctttgccatcctcatgtttgccatcatt
ggcctggagttctacatgggcaagttccacaaggcctgtttccccaacagcacagatgca
gagcccgtgggtgacttcccctgtggcaaggaggccccagcccggctgtgtgagggcgac
actgagtgccgggagtactggccaggacccaactttggcatcaccaactttgacaacatc
ctgtttgccatcttgacggtgttccagtgcatcaccatggagggctggactgacatcctc
tacaatacaaacgatgcggccggcaacacctggaactggctctacttcatccctctcatc
atcatcggctccttcttcatgctcaacctggtgctgggcgtgctctcgggggagtttgcc
aaggagcgagagagggtggagaaccgccgcgccttcctgaagctgcgccggcagcagcag
atcgagcgagagctcaacggctacctggagtggatcttcaaggcggaggaagtcatgctg
gccgaggaggacaggaatgcagaggagaagtcccctttggacgcagtgctgaagagagcg
gccaccaagaagagcagaaatgacctgatccacgcagaggagggagaggaccggtttgca
gatctctgtgctgttggatcccccttcgcccgcgccagcctcaagagcgggaagacagag
agctcgtcatacttccggaggaaggagaagatgttccgcttttttatccggcgcatggtg
aaggctcagagcttctactgggtggtgctgtgcgtggtggccctgaacacactgtgtgtg
gccatggtgcattacaaccagccgcggcggctcaccacggcgctgtattttgcagagttt
gttttcctgggtctcttcctcacagagatgtccctgaagatgtatggcctggggcccaga
agctacttccggtcctccttcaactgcttcgactttggggtcatcgtggggagcgtcttt
gaagtggtctgggcggccatcaagccgggaagctcctttgggatcagcgtgctgcgggcc
ctccgcctgctgaggatcttcaaagtcacgaagtactggagctccctgcggaacctggtg
gtgtccctgctgaactccatgaagtccatcatcagcctgctcttcttgctcttcctgttc
attgtggtcttcgccctgctggggatgcagctgtttgggggacagttcaacttccaggat
gagactcccacaaccaactttgacaccttccctgccgccatcctcactgtcttccagatc
ctgacgggagaggactggaatgcagtgatgtatcatgggatcgagtcgcaaggcggcgtc
agcaaaggcatgttttcatccttttacttcattgtcctgacgctgttcggaaactacact
ctgctgaatgtctttctggccatcgctgtggacaacctggccaacgcccaagagctgacc
aaggatgaagaggagatggaagaagcagccaatcagaagcttgctctgcaaaaggccaaa
gaagtggccgaagtcagccccatgtctgccgcgaacatctccatcgctgcttttgtaaag
caagctcgaggtactgtatctcgcagctcatctgtctccagcgtgaactcacccaggcag
cagaactcggccaaggcgcgctcggtgtgggagcagcgggccagccagctacggctgcag
aacctgcgggccagctgcgaggcgctgtacagcgaaatggaccccgaggagcggctgcgc
ttcgccactacgcgccacctgcggcccgacatgaagacgcacctggaccggccgctagtg
gtggagctgggccgcgacggcgcgcgggggcctgtgggaggcaaggcccggcctgaggct
gcggaggcccccgagggcgtcgaccctccgcgcaggcaccaccggcaccgcgacaaggac
aagacccccgcggcgggggaccaggaccgagcagaggccccgaaggcggagagcggggag
cccggtgcccgggaggagcggccgcggccgcaccgcagccacagcaaagaagctgcgggg
cccccggaggcgcggagcgagcgcggccgaggcccaggccccgagggcggccggcggcac
caccggcgcggctccccggaggaagcggccgagcgggagccccgacgccaccgcgcgcac
cggcaccaggatccgggcaaggagtgcgccggggccaagggcgagcggcgcgcgcggcac
cgcggcggcccccgagcgggggcccgggaggcggagagcggggaggagccggcgcggcgg
caccgggcccggcacaaggcgcagcctgcgcaggaggctgtggagaaggaggccacggag
aaggaggctgagatagtggaagccgacaaggagagggagctccggaaccaccagcccagg
gagccacactgtgacctggagaccggtgggactgtgactgtgggccctatgcacacactg
cccagcacatgtctccagaaggtggaggaacagccagaggatgcagacaatcagcggaac
gtcactcgcatgggcagtcagcccccagacccgaacactgttgtacacatcccagtgatg
ctgactggccctcctggggaagccacggtcgttcccagtggtaacgtggacctggaaagc
caagcagaggggaagaaggaggtggaagcagatgacgtgatgaggagcggcccccggccc
atcgtcccatacagctccatgttctgtttaagccccactaacctgctccgccgcttctgc
cactacatcgtgaccatgaggtacttcgagatggtcattctcgtggtcatcgccttgagc
agcattgccctggctgctgaggacccagtgcgcacggactcgcccaggaacaatgctctg
aaatacctggattacattttcactggtgtctttacctttgagatggtgataaagatgatc
gacttgggactgctgcttcaccctggggcctatttccgggacttgtggaacattctggac
ttcattgtggtcagtggtgccctggtggcgtttgctttctcgagcttcgtgggaggatcc
aaagggaaagacatcaataccatcaagtccctgagagtccttcgcgtcctgcggcccctc
aagaccatcaaacggctgcccaagctcaaggctgtgtttgactgtgtggtgaactccctg
aagaatgtcctcaacatcttgattgtctacatgctcttcatgttcatatttgccgtcatt
gcggtgcagctcttcaaagggaagtttttctactgcacagatgaatccaaggagctggag
agggactgcaggggtcagtatttagattatgagaaggaggaagtggaagctcagcccagg
cagtggaagaaatacgactttcactacgacaatgtgctctgggccctgctgacgctgttc
acagtgtccacgggagaaggctggcccatggtgctgaaacactccgtggatgccacctat
gaggagcaggggccgagccctgggtaccgcatggagctgtccatcttctacgtggtctac
tttgtggtctttcccttcttctttgtcaacatctttgtggccttgatcatcatcaccttc
caggagcagggggacaaggtgatgtctgaatgcagcctggagaagaacgagagggcttgc
attgacttcgccatcagcgccaaacccctgacacggtacatgccccaaaacaggcagtcg
ttccagtataagacgtggacatttgtggtctccccgccctttgagtacttcatcatggcc
atgatagccctcaacaccgtggtgctgatgatgaagttctatgatgcaccctatgagtac
gagctgatgctgaaatgcctgaacatcgtgttcacatccatgttctccatggaatgcgtg
ctgaagatcatcgcctttggggtgctgaactatttcagagatgcctggaatgtctttgac
tttgtcactgtgttgggaagtattactgatattttagtaacagagattgcgaacaatttc
atcaacctcagcttcctccgcctcttccgagctgcgcggctgatcaagctgctccgccag
ggctacaccatccgcatcctgctgtggacctttgtccagtccttcaaggccctgccctac
gtgtgtctgctcattgccatgctgttcttcatctacgccatcatcggcatgcaggtgttt
gggaatattgccctggatgatgacaccagcatcaaccgccacaacaacttccggacgttt
ttgcaagctctgatgctgctgttcaggagcgccacgggggaggcctggcacgagatcatg
ctgtcctgcctcagcaaccaggcctgtgatgagcaggccaatgccaccgagtgtggaagc
gactttgcctacttctacttcgtctccttcatcttcctgtgctcctttctgatgttgaac
ctctttgtggctgtgatcatggacaattttgagtaccttacgcgggactcttccatccta
ggtcctcaccacttggacgagttcatccgggtctgggctgaatacgacccggctgcgtgt
gggcgcatcagttacaatgacatgtttgagatgctgaaacacatgtccccacctctgggg
ctggggaagaaatgccctgctcgagtggcttacaagcgcctggttcgcatgaacatgccc
atctccaacgaggacatgactgtccacttcacgtccacactgatggccctcatccggacg
gcactggagatcaagctggccccagctgggacaaagcagcatcagtgtgatgcagagctg
aggaaggagatttccgttgtgtgggccaatctgcctcagaagactttggacttgctggta
ccaccccataagcctgatgagatgacagtggggaaggtttatgcagctctgatgatattc
gacttctacaagcagaacaaaaccaccagagaccagatgcagcaggctcctggaggcctc
tcccagatgggtcctgtgtccctgttccaccctctgaaggccaccctggagcagacacag
ccggctgtgctccgaggagcccgggttttccttcgacagaagagttccacctccctcagc
aatggcggggccatacaaaaccaagagagtggcatcaaggagtctgtctcctggggtact
caaaggacccaggatgcgccccacgaggccaggccacccctggagcgtggccactccaca
gagatccctgtggggcagtcaggagcactggctgtggacgttcagatgcagagcataacc
cggaggggccctgatggggagccccagcctgggctggagagccagggtcgagcggcctcc
atgccccgccttgcggccgagactcagcccgtcacagatgtcagccccatgaagcgctcc
atctccacgctggcccagcggccccgtgggactcatctttgcagcaccaccccggaccgc
ccaccccctagccaggcgccgcaccaccaccaccaccgctgccaccgccgcagggacagg
aagcagaggtccctggagaaggggcccagcctgtctgccgatacggatggcgcaccaagc
agtgctgcggggccggggctgcccccgggagaggggcctacaggctgccggcgggaacga
gagcgccggcaggagcggggccggtcccaggagcggaggcagccctcatcctcctcctcg
gagaagcagcgcttctactcctgcgaccgcttcgggggccgtgagcccccgaagcccaag
ccctccctcagcagccaccccacgtcgccaacagctggccaggagccaggaccccaccca
cagggcagtggttccgtgaatgggagccccttgctgtcaacatctggtgctagcaccccc
ggccgcggtgggcggaggcagctcccccagacgcccctgactccccgccccagcatcacc
tacaagacagccaactcctcacccgtccacttcgccggggctcagaccagcctccctacc
ttctccccgggccggctcagccgtgggctttccgaacacaacgccctgctgcagagagac
cctctcagccagcccctggcccctggctctcgaatcggctctgacccttacctggggcag
cgtctggacagtgaggcctctgtccacgccctgcctgaggacacgctcactttcgaggag
gctgtggccaccaactcgggccgctcctccaggacttcctatgtgtcctccctgacctcc
cagtctcaccctctccgccgcgtgcccaacggttaccactgcaccctgggactcagctcg
ggtggccgagcacggcacagctaccaccaccctgaccaagaccactggtgctag

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