Symphalangus syndactylus (siamang): 129478636
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Entry
129478636 CDS
T10134
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04014
Ras signaling pathway
ssyn04015
Rap1 signaling pathway
ssyn04020
Calcium signaling pathway
ssyn04024
cAMP signaling pathway
ssyn04080
Neuroactive ligand-receptor interaction
ssyn04082
Neuroactive ligand signaling
ssyn04713
Circadian entrainment
ssyn04720
Long-term potentiation
ssyn04724
Glutamatergic synapse
ssyn05010
Alzheimer disease
ssyn05014
Amyotrophic lateral sclerosis
ssyn05016
Huntington disease
ssyn05017
Spinocerebellar ataxia
ssyn05020
Prion disease
ssyn05022
Pathways of neurodegeneration - multiple diseases
ssyn05030
Cocaine addiction
ssyn05031
Amphetamine addiction
ssyn05033
Nicotine addiction
ssyn05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
129478636 (GRIN1)
04015 Rap1 signaling pathway
129478636 (GRIN1)
04020 Calcium signaling pathway
129478636 (GRIN1)
04024 cAMP signaling pathway
129478636 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129478636 (GRIN1)
04082 Neuroactive ligand signaling
129478636 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
129478636 (GRIN1)
04720 Long-term potentiation
129478636 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
129478636 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
129478636 (GRIN1)
05014 Amyotrophic lateral sclerosis
129478636 (GRIN1)
05016 Huntington disease
129478636 (GRIN1)
05017 Spinocerebellar ataxia
129478636 (GRIN1)
05020 Prion disease
129478636 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
129478636 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
129478636 (GRIN1)
05031 Amphetamine addiction
129478636 (GRIN1)
05033 Nicotine addiction
129478636 (GRIN1)
05034 Alcoholism
129478636 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssyn04040
]
129478636 (GRIN1)
Ion channels [BR:
ssyn04040
]
Ligand-gated channels
Glutamate (ionotropic)
129478636 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
129478636
NCBI-ProteinID:
XP_055126215
LinkDB
All DBs
Position
3:complement(7668074..7697205)
Genome browser
AA seq
1010 aa
AA seq
DB search
MSTMRLLTLALLFSCSVARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLMEAKELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGILGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTVRGRAPQSRVRLHLPCPACVSRPITPPRTLGSCGPLCPS
PCGGRSAQPAHAALSHSLDLSPRPSWVLGFPRVSPLVCPPTSPAMTHTPS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgacgctcgccctgctgttctcctgctccgttgcccgtgcg
gcgtgcgaccccaagatcgtcaacattggcgcggtgctgagcacgcggaagcacgagcag
atgttccgcgaggccgtgaaccaggccaacaagcggcacggctcctggaagattcagctc
aatgccacctccgtcacgcacaagcccaacgccatccagatggctctttcggtgtgcgag
gacctcatctccagccaggtctacgccatcctagttagccatccacctacccccaacgac
cacttcactcccacccctgtctcctacacagccggcttctaccgcatccccgtgctgggg
ctgaccacccgcatgtccatctactcggacaagagcatccacctgagcttcctgcgcacc
gtgccgccctactcccaccagtcgagcgtgtggtttgagatgatgcgtgtctacagctgg
aaccacatcatcctgctggtcagcgacgaccacgagggccgggcggctcagaagcgcctg
gagacgctgctggaggagcgtgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgacaacaagcgcggacccaaggcagagaaggtgctgcagtttgaccca
gggaccaagaacgtgacggccctgctgatggaggcgaaagagctggaagcccgggtcatc
atcctttctgccagcgaggacgatgctgccactgtataccgcgcagccgcaatgctgaac
atgacgggctccgggtacgtgtggctggtcggggagcgcgagatctcggggaacgccctg
cgctacgccccggacggtatcctcgggctgcagctcatcaacggcaagaacgagtcggcc
cacatcagcgacgccgtgggcgtggtggcccaggccgtgcacgagctcctcgagaaggag
aacatcaccgacccgccgcggggctgcgtgggcaacaccaacatctggaagaccgggccg
ctcttcaagagagtcctgatgtcttccaagtatgcggacggggtgaccggtcgtgtggag
ttcaatgaggatggggaccggaagttcgccaactacagcatcatgaacctgcagaaccgc
aagctggtgcaagtgggcatctacaacggcacccacgtcatccctaatgacaggaagatc
atctggccaggcggagagacagagaagcctcgagggtaccagatgtccaccagactgaag
attgtgacgatccaccaggagcccttcgtgtacgtcaagcccacgctgagtgatgggaca
tgcaaggaggagttcacagtcaacggcgacccagtcaagaaggtgatctgcaccgggccc
aatgacacgtcgccgggcagcccccgccacacggtgcctcagtgctgctacggcttttgc
atcgacctgctcatcaagctggcacggaccatgaacttcacctacgaggtgcacctggtg
gcagatggcaagttcggcacacaggagcgggtgaacaacagcaacaagaaggagtggaat
gggatgatgggcgagctgctcagcgggcaggcagacatgatcgtggcgccgctaaccata
aacaacgagcgcgcgcagtacatcgagttttccaagcccttcaagtaccagggcctgact
attctggtcaagaaggagatcccccggagcacgctggactcgttcatgcagccgttccag
agcacactgtggctgctggtggggctgtcggtgcacgtggtggccgtgatgctgtacctg
ctggaccgcttcagccccttcggccggttcaaggtgaacagcgaggaggaggaggaggac
gcattgaccctgtcctcggccatgtggttctcctggggcgtcctgctcaactccggcatc
ggggaaggcgcccccagaagcttctcggcgcgcatcctgggcatggtgtgggccggcttt
gccatgatcatcgtggcctcctacaccgccaacctggcggccttcctggtgctggaccgg
ccggaggagcgcatcacgggcatcaacgaccctcggctgaggaacccctcggacaaattt
atctacgccacggtgaagcagagctccgtggacatctacttccggcgccaggtagagctg
agcaccatgtaccggcatatggagaagcacaactacgagagtgcggcggaggccatccag
gccgtgcgagacaacaagctgcatgccttcatctgggactccgcggtgctggagttcgag
gcctcgcagaagtgcgacctggtgacgactggagagctgttcttccgctcgggcttcggc
ataggcatgcgcaaagacagcccctggaagcagaacgtctccctgtccatcctcaagtcc
catgagaatggcttcatggaagacctggacaagacgtgggttcggtatcaggaatgtgac
tcgcgcagcaacgcccctgcgacccttacttttgagaacatggcaggggtcttcatgcta
gtagctgggggcatcgtggccgggatcttcctgattttcattgagattgcctacaagcgg
cacaaggatgctcgccggaagcagatgcagctggcctttgcagccgtgaacgtgtggagg
aagaacctgcaggatagaaagagtggtagagcagagcctgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcttccagcttcaagagacgtaggtcctccaaagac
acggtaagggggagagcaccccagtcccgcgtccgactccacctgccctgccctgcgtgt
gtctcccgccccatcaccccgccccggaccctgggctcctgtggcccactctgcccgtct
ccctgcggcggccgctctgcccagcccgcccacgctgctctctctcactctctggacctt
tctccccggccctcctgggtcctcggctttccccgtgtgtctccgttagtctgcccgccc
acctcccctgccatgacccacacgccatcttga
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