Symphalangus syndactylus (siamang): 129478762
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Entry
129478762 CDS
T10134
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04015
Rap1 signaling pathway
ssyn04510
Focal adhesion
ssyn04722
Neurotrophin signaling pathway
ssyn04910
Insulin signaling pathway
ssyn05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
129478762 (RAPGEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129478762 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
129478762 (RAPGEF1)
09156 Nervous system
04722 Neurotrophin signaling pathway
129478762 (RAPGEF1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
129478762 (RAPGEF1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
129478762
NCBI-ProteinID:
XP_055126621
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Position
3:13038460..13201514
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AA seq
1264 aa
AA seq
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MSGGLGLRRSPEMSGKIEKADSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVKI
PEKPVNKEATDRFLPEGYPLPLDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVSA
LRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQNDPRIQHSSALSSCYSRVYQSLA
NLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPSS
PAGKPDGPAELPLTDREVEILNKTTGMSQSTELLPDATDEEVAPPKPPLPGIRVVDNSPP
PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSHSYGG
ESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQI
PQQTAWNLSPLPESLGESGSPFLGPPFQLPLGGHPQPDGPLAPGQQTDTPPALPEKKRRS
AASQTADSSGCRVSYERHPSQYDNISGEDLQSTAPIPSVPYAPFAAILPFQHGGSSAPVE
FVGDFTAPESTSDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQNEHIYQQKN
KLLMEVYGFSDSFSGVDSVQELAPPPALPPKQRQLQASCAASSFSSVSYCVQQTKVAFTP
EDGSAAQGLSVSVSNSFLSRHGSLPVPSYKSVFRSYSQDFVPHHQASVPPFLPPTSSSSP
HFPPAHQSQSSDLAVPTMAGPPPSTVDGPLSASQESSFHGNAVCLPSETSFTDSSENASE
EAGEGEYVNLYSSGQSSEELAPSRGEPPAGKDGHPRDPSAVSGVPGKDSRDGSERAPKSP
DALESAQSEEEVDELSLIDHNEIMSRLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLV
LYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVE
LTEEILKLLMELVFRLVCNGELSLARVLRKNILDKVDQKKLLRCATSGQPLAARGVAARP
GTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWV
RSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEG
LAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKRW
QQFNILDSMRCFQQAHYDIRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDR
EEKT
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcctcggcctccggcgcagcccggaaatgtccggcaagatagagaaagca
gactctcagcgttctcatctctcttccttcaccatgaagctgatggacaaattccactca
cccaaaatcaagagaacgccatcaaagaagggaaaaccagctgaggtgtccgtaaagatt
ccagagaagcctgtgaacaaagaggcaacagacagatttctaccagagggctaccctctc
cccttggatctggagcagcaggcagtagaatttatgtccaccagtgctgtggcttccagg
tctcaaaggcagaagaacctgagctggctggaggagaaagagaaggaagttgtcagtgcc
ctgcgctactttaagaccattgtggacaaaatggcaattgataagaaggtactggagatg
cttccagggtcagccagcaaggtgctggaggccatcttacccctggtgcagaacgaccct
cgaattcagcacagctcagccctctcttcctgctatagccgagtgtaccaaagtctcgcc
aacctcattcgctggtctgaccaagtgatgctggaaggtgtgaactcagaagacaaggag
atggtgacgactgtgaagggggtcatcaaggctgtgctggatggagtgaaggagctggtc
aggctcaccatcgagaagcagggacgtccgtctccgacgagccccgtgaagcccagttcc
cctgccggcaagcctgatggcccagcagagctccccctgacagaccgcgaggtagagatc
ctaaacaagacgactgggatgtcacagtcaactgagctcctcccagatgccacggatgaa
gaggttgcgccccccaagcctcctctgcctggcattcgggtggttgataatagtcctcca
ccagcattgccacccaagaaaagacagtcggcgccatcccctacccgagtggctgtggtg
gcccccatgagccgagccaccagtggctccagtttgcctgttggaatcaataggcaggat
tttgacgttgactgttatgcacagaggcgactgtcaggaggcagccactcgtatggtgga
gagtcgccccgcctctccccctgcagcagcataggcaagctcagcaagtcagatgagcag
ctgtcctctctggacagggacagtgggcagtgctcccggaacacaagctgtgaaacacta
gaccactatgatcccgactatgaattcctccagcaagacctctctaacgcagaccagata
cctcagcagacggcctggaaccttagcccgttgccagagtctttgggggagtctgggtct
ccatttcttggccctcctttccagctgcctcttggcggccatccccagccagacggacct
ctggccccagggcagcagacagatacgccgcctgctctccccgagaagaagcgcaggagc
gcagcctcccagacggcggacagctctggctgcagggtgtcctacgagcggcatccctcg
cagtatgacaacatctctggggaggacctacagagcacagccccgatcccatccgtcccc
tacgcgccctttgctgctattctgccctttcagcatggaggttcctcagcccctgtcgaa
tttgtgggtgattttactgctcctgaatcaacgagtgacccagaaaaaccacctcctcta
ccagagaagaaaaacaaacacatgctggcctacatgcagttgctggaggactactcggag
ccgcagccctctatgttctaccagacgcctcagaacgagcacatctaccagcagaagaac
aaactcctcatggaggtatacggcttcagcgactccttcagtggggtggactctgtgcag
gagctggccccgccacccgccctaccccccaagcagcggcagctgcaggcctcctgtgct
gcttcttccttctcctctgtctcctactgtgtccagcaaactaaagtggccttcaccccc
gaggacggcagtgccgctcagggcctcagtgtgtccgtctctaactcctttctcagccgg
cacggcagcttgcccgtgccctcgtataagtctgtgtttaggtcctactcccaggatttc
gtgcctcaccaccaagcttccgttccgcctttccttccgcctacctcctcttcctctcca
catttcccacctgcccaccagtctcagagctctgacttagccgtgccaaccatggccggt
ccacctcccagcaccgtggacgggcctctctcggcttctcaggagagcagctttcatggg
aatgctgtctgccttccttccgaaacctctttcactgactcgagtgaaaacgccagtgag
gaagctggtgagggtgaatatgtcaatctgtattcctctggccagagcagcgaggagctg
gctccctctcgaggagaaccaccggctgggaaagacggacatcccagagatccctcagca
gtcagcggcgtccctgggaaggacagcagagacggcagtgagagggccccaaagtcacca
gatgctctggagtcggctcagtcggaggaggaagtggacgagctgtccctcatcgaccac
aacgaaattatgtccaggctgacgctcaagcaggagggcgacgacgggccggacgtccgc
ggaggatctggggacatcttattggtccatgccactgagactgacaggaaagatttggtg
ttgtactgcgaggcgttcctgaccacctacaggaccttcatctccccagaggagctcatc
aagaagctgcagtacagatacgagaaattctctccctttgccgacacattcaagaagcgc
gtcagcaagaacacgttcttcgtgctggtacgggtggtggatgagctctgcctggtggag
ttgacagaagagatcctgaagctgctgatggaactggtcttccgcctggtgtgcaacggg
gagctgagcctggcccgtgtgctccggaagaacatcttggacaaggtggaccagaagaag
ctactcaggtgtgccacctccggccagcccctggcggcccggggggtagcagccaggccg
gggaccttgcacgactttcacagccatgagatagcggagcagctgacgctgctggatgct
gagctcttctataaaatagagattcctgaggttttgctttgggcaaaagagcagaatgag
gagaagagccccaacttgacccagttcacggagcacttcaacaacatgtcctactgggtc
cggtccataatcatgttacaagaaaaggcccaggacagggaacggctgctcttgaagttc
atcaaaatcatgaagcacttgcggaagctgaataacttcaactcctacttggccatcctc
tctgccctggactcggcgcccatccgcaggctggagtggcagaagcagacttcagagggc
ctggccgagtactgcacactgatcgacagctcgtcctccttccgagcctaccgggccgcc
ctctcggaggtggaaccgccgtgcatcccgtacctggggctgatcctgcaggacctgacc
ttcgttcacctgggaaacccagactacatcgacgggaaagtgaacttctccaagcggtgg
cagcagttcaacatccttgacagcatgcggtgcttccagcaggcgcactatgacatccgg
aggaacgacgacattataaacttcttcaatgacttcagtgaccacctggctgaggaggcc
ctatgggaactctctctgaaaattaaacccaggaacataacaaggagaaaaacagaccgg
gaagagaagacctag
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