KEGG   Symphalangus syndactylus (siamang): 129478801
Entry
129478801         CDS       T10134                                 
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 isoform X1
  KO
K14311  nuclear pore complex protein Nup188
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn03013  Nucleocytoplasmic transport
ssyn05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129478801 (NUP188)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    129478801 (NUP188)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssyn03019]
    129478801 (NUP188)
Messenger RNA biogenesis [BR:ssyn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     129478801 (NUP188)
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N Nup188_SH3-like HEAT_SCC3-SA TRS130_4HB Gar1
Other DBs
NCBI-GeneID: 129478801
NCBI-ProteinID: XP_055126742
LinkDB
Position
3:complement(15799881..15864381)
AA seq 1749 aa
MAAAAGGLCVRSSRELWTILLGRSALRELSQIEAELNKHWRRLLEGLSYYKPPSPSSAEK
VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTWDSVKTVLQDERQSQA
LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVSKYRQQFEEL
YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK
EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG
LICQDMDCLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR
LLQSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDIIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH
KPNDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHPVSSLSQMISAEGMNA
GGYGNLLMNSEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK
WRYNSHGVREQIGCLILELIHAILNLCHETELHSSHTPSLQSLCICSLAYTEAGQTVINI
MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA
LSQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA
FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGIWSCLH
VVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSIEKRFAYWSGYVK
SLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTHADIMHLTDSVVRRQLFLDVLDGT
KALLLVPASVNCLRLGSMKCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLME
KTKAKVFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLALGSATE
DKDSMETDDCSRSRHRDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL
EVSLRMKQNLHFTEATLHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTAQT
PSASRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVRTV
QSLACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDIQVNLGYLCQACTSLLHSRKMLQH
YLQNKNGDGLPSAVAQRVQRPPSAASAAPSSSKQPAADTEASEQRALHTVQYGLLKILSR
TLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALNM
LGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHPRDK
QRMKQELSSELSTLLSSLSRYFRRGAPSSPATGVLPSPQGKSTSLSKASPESQEPLIQLV
QAFVRHVQR
NT seq 5250 nt   +upstreamnt  +downstreamnt
atggcggcggccgcaggcgggctgtgtgtgaggagcagtagagaactgtggactattctg
cttggaaggtcagctctgagagagctgagtcagattgaggcagaactgaataaacattgg
cggcgattgttagaggggctttcttactacaaacctcccagtccaagttcagctgaaaaa
gtgaaagctaataaagatgtagcttcaccattgaaggaactgggtttaagaatcagcaag
tttttgggtcttgatgaagaacaaagtgtgcagttactccagtgttacctgcaagaggac
tacaggggtacttgggactcagtaaagacagtactgcaagatgagaggcagagccaggcc
ttaatcctgaagattgcagattattattatgaagaaagaacctgtattcttcgttgtgtc
ttacaccttctcacttacttccaagatgaaagacacccctatagggttgaatatgcagac
tgtgttgataaattggagaaggaactagtttcaaaatacagacagcagtttgaagagctt
tataaaactgaagcaccaacttgggagacacatggaaatctcatgacagagcgccaagtg
tctcgctggtttgttcagtgccttcgggaacagtccatgctgctagaaattattttcctt
tattatgcatactttgagatggcacccagtgacttacttgtattaaccaagatgtttaaa
gagcaaggatttggtagtaggcagaccaataggcacctggtggatgagactatggatcct
tttgtagatcggattggctacttcagtgccctcatcctggtggagggcatggatattgag
tccttgcataagtgtgctttggatgacagaagagaactgcatcagtttgcacaggatggg
cttatttgtcaggatatggactgtttaatgttgacctttggggacattccacatcatgcc
ccagtgcttttggcctgggctctcctccgtcacactctgaacccagaagagacaagcagt
gtggtccggaagataggtggcacagccatccagctgaatgtgtttcagtacttgacccga
ttgctccagtcacttgccagtgggggaaatgattgcaccaccagcactgcatgcatgtgt
gtctatggactgctctctttcgttctgacctcgttggagctgcacacactgggcaatcag
caggatataattgatacagcatgtgaagtcttggccgacccttctcttccggaactgttc
tgggggacagagccaacttctggccttgggatcattctggacagtgtgtgtggaatgttt
ccccacctcctctccccactcctgcaactgctccgagccctggtatcagggaagtccaca
gccaaaaaggtgtatagcttcttggataagatgtctttctacaatgaactttataaacac
aagcctaatgatgtgatctcccatgaggatggaactctttggcggagacaaacacccaaa
ctcctttatccccttgggggtcaaaccaaccttcgcatacctcaaggcactgtgggccaa
gtaatgttggatgatagggcatacctggtacgctgggaatactcctatagcagctggacc
ctctttacctgcgagattgaaatgttgcttcatgttgtttcaactgcagatgtgattcag
cactgccagcgagtcaaacccatcattgatctcgtccataaggtcatcagtacagacctg
tcgatagcagactgtctcctgcccatcacgtctcgcatctacatgctgctgcagcggtta
acgacagtgatctccccacctgtggatgtcattgcttcttgtgtcaactgcttaactgtt
ttggctgcccgcaatccagcaaaggtctggactgatcttcgtcacacaggttttttacca
tttgtggcccatcctgtctccagcctgagtcagatgattagtgcggaagggatgaatgct
ggagggtacggaaacctcttgatgaatagtgaacagcctcagggcgagtatggagttact
attgcctttctgcgcttgatcaccacccttgtcaaggggcaacttggtagtacccagagc
caaggacttgtaccctgtgtaatgtttgtgctgaaggagatgcttcccagctaccataag
tggcgctacaactctcatggagtgagggaacagattggttgcctgatcctggagctgatt
catgcgatactgaacctgtgccacgagacagagctgcacagcagtcatactcccagcctg
cagtctctctgcatctgcagcctggcatacacagaagcaggacagacagttatcaatatc
atgggcattggcgtggacaccattgacatggtgatggctgctcagcctcgaagtgatggg
gcagagggccaggggcagggccagctgctgatcaagacagtgaaactggcattctccgtc
accaacaatgttattcggctgaaacctccttctaatgtggtgtcccccctggaacaggct
ctctcacaacatggtgctcatggaaacaacctcattgctgttctagccaaatacatctac
cacaaacatgaccctgctttgccacgtcttgccattcagctgctgaaacgtctggccacg
gtggccccaatgtcagtgtatgcttgtctgggcaacgatgcggctgccattcgtgatgcc
ttcctgacccgattgcagagcaaaattgaggacatgcgcatcaaagtcatgattctagag
ttcctcacggttgcagtagagacccagccaggcctcatcgaactgtttctgaacctggaa
gttaaggatggcagtgatggctcaaaggaattcagccttgggatttggagctgtctccat
gtagtgctggagctgattgattcccaacagcaagatcgatactggtgcccacccctgctg
catcgtgccgccattgcctttttgcatgctctgtggcaggatcggagggacagtgccatg
ctggtcctccgaaccaaacccaagttttgggaaaatttaaccagtccgctgtttggaacc
ctttctcctccctctgaaacatcagagcccagcatcctggaaacctgtgccctaatcatg
aagataatttgcttggagatatactatgtagttaagggttcattagaccagtcgctaaaa
gatacactgaagaaattttccatcgagaaacgctttgcctactggtcagggtatgtcaag
tcattggcagttcatgtggccgaaacagaaggcagcagctgcacctccttgttagagtac
cagatgctggtgtccgcctggaggatgcttctcatcattgccaccactcatgcagatata
atgcacctgactgactctgtggtgcgtcgccagctctttcttgacgtgcttgatggaacc
aaagcgttactcctagttccagcctcagtgaactgccttcgcctcggctccatgaagtgc
actctgctgcttatccttctccggcagtggaagagagagttaggttctgtggatgaaatc
cttggacccttgacggagatcctggagggagtgctgcaggccgaccagcaactcatggag
aagaccaaggccaaggtgttctcagcattcatcacagtgttgcaaatgaaggagatgcga
gtaagtgacatcccccagtactcccagctggtgctgaatgtctgtgagaccctccaagag
gaagtgattgcactcttcgaccagacccgccacagtctggcattaggcagtgccacagag
gacaaggacagcatggagactgacgactgttctcggtcccggcacagggaccagcgtgat
ggggtgtgtgtcttgggcctgcacctggccaaggagctgtgtgaggtagacgaggatggt
gactcctggctgcaggtaacccgcaggctccccatcctacccaccctcctcaccactcta
gaggttagccttcgcatgaagcagaacctgcatttcactgaggccacattgcatctgctc
ctcaccctggctcgcactcagcagggagccacagcagtggctggagctggcatcacccag
agcatttgtttgccccttctgagtgtgtaccagctgagcaccaatggcacagcacagaca
cctagtgcctctcggaagtccctggatgccccctcttggccaggagtctaccgcctgtcc
atgtccttgatggagcggctgctcaaaactctgcgctacaacttcctgactgaggccctg
gacttcgtgggtgtccaccaggagcggaccttacagtgcctcaatgcagtgaggacagtg
cagagtctggcctgcctggaggaggcggaccacaccgtgggttttattctgcagctctcc
aacttcatgaaggagtggcacttccacctgcctcagctcatgcgtgatatccaggtcaac
ctgggttacttgtgccaggcatgcacttccctcctgcacagtcgaaagatgctacagcat
tacttacagaacaaaaatggggatggcctcccctcggccgttgcccagcgagtccagagg
ccaccgtctgctgcttctgctgccccctcctcctccaagcagcctgctgctgacacagag
gcatcagagcagcgggccttgcacacagtccagtatggccttctcaagatcctcagcagg
acactggcagccctgcgccacttcaccccagatgtctgccagatcctgctggatcagtcc
ctggaccttgctgaatacaacttcctgtttgccctgagctttaccactcccacctttgac
tccgaagtggccccctccttcgggacccttctggccacagtgaatgtggctctcaacatg
cttggagagctggacaagaaaaaggagcccctcacccaggcagtggggctcagcacacag
gcagaagggaccaggacgttaaagtccctcctgatgtttaccatggaaaactgcttctac
ctgctcatctctcaggcgatgcggtaccttagggacccggctgtgcacccccgggacaaa
cagcggatgaagcaggagctcagctctgagttgagcacgctgctctccagcctctcgcgc
tacttccgccggggagcccccagctcccctgccactggtgtcctcccctcgccgcagggc
aagtccacttctctctccaaagccagccctgagagtcaggagcctctgatccagctggtg
caggcgtttgtccggcacgtgcaaagatag

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