Symphalangus syndactylus (siamang): 129479757
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Entry
129479757 CDS
T10134
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04140
Autophagy - animal
ssyn04148
Efferocytosis
ssyn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129479757 (VPS11)
04148 Efferocytosis
129479757 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129479757 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129479757 (VPS11)
Membrane trafficking [BR:
ssyn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129479757 (VPS11)
Hops complex
129479757 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf-HC5HC2H
zf-ANAPC11
zf-C3HC4_3
zf-RING-like
zf_RING_Vps8_fungal
DUF1993
DLP_helical
DUF5847
Motif
Other DBs
NCBI-GeneID:
129479757
NCBI-ProteinID:
XP_055129403
LinkDB
All DBs
Position
3:136122593..136137680
Genome browser
AA seq
945 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKEPLGNDGAAPGATPASGSAASKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVCPQVKIW
NLEKRDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRH
SKTQILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCS
ALSDPSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLIIVSRDRKVSPKS
EFTSRDSQSSDKQILNIYDLCNKFIAYSTVFEDVVDVLAEWGSLYVLTRDGRVHALQEKD
TQTKLEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIG
KLEPSYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKT
KSESEVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKL
PFEQAESNMKRYGKILMHHIPEQTTQLLKGLCTDYRPSLEGRSDREAPGCRANSEEFIPI
FANNPRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQVKEKLHAEAISLLKS
GRFCDVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVITVCERHGEQD
PSLWEQALSYFARKEEDCKEYMAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIRDYLV
QKLQKQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHF
LCGHSFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFS
VIADYFGRGVFNKLTLLTDPPTARLTSSLEAGLQRDLLMHSRRGT
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacctgcagtggcggcgcttcgttttcttcgacaaggagctggtgaaggag
ccgctgggcaatgatggggcggctcccggggccacacctgcttctggatccgctgcttcc
aagttcctttgcctccctcctggcatcacggtttgcgactcaggccgagggagcctggtc
tttggagatatggaaggccagatctggttcttgccacgttccctacagcttacgggcttc
caggcctacaaactacgggtgacacacctgtaccaactgaagcagcacaatattctggca
tctgttggagaagatgaagagggcatcaaccccttggtctgtccacaggttaagatctgg
aacctggagaagagagatggtggcaatccactctgcactcgaatcttccctgctattcca
ggaacagagccaactgttgtatcttgtttgactgtccatgaaaatctcaactttatggcc
attggtttcacagatggcagtgttacattgaacaaaggagacatcacccgggaccggcat
agcaagacccagattttgcacaagggcaactatcctgtaactggattggcctttcgccaa
gcaggaaagaccactcacttgtttgttgtgacaacggagaatgtccagtcctatatagtt
tctggaaaagactaccctcgcgtggagttggacacccatggttgtggcctgcgctgctca
gccctaagtgacccttctcaggacctgcagttcattgtggccggggatgagtgtgtctac
ttgtaccagcctgatgaacgtgggccctgcttcgcctttgagggccataagctcattgcc
cactggtttagaggctaccttatcattgtctcccgtgaccggaaggtttctcccaagtca
gagtttaccagcagggattcacagagctccgacaagcagattctaaacatctatgacctg
tgcaacaagttcatagcctatagcaccgtctttgaggatgtagtggatgtacttgctgag
tggggctccctgtacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggac
acacagaccaaactggagatgctgtttaagaagaacctatttgaaatggcgattaacctt
gccaagagccagcatctggacagtgatgggctggcccagattttcatgcagtatggagac
catctctacagcaagggcaaccatgatggggctgtccagcagtatatccgaaccattgga
aagttggagccgtcctatgtgatccgcaagtttctggatgcccagcgcattcacaacctg
actgcctacctgcagaccctgcaccgacaatccctggccaatgccgaccataccaccctg
ctcctcaactgctataccaagctcaaggacagctcgaagctggaggagttcatcaagaca
aagagtgagagtgaagtccactttgatgtggagacagccatcaaggtcctccggcaggct
ggctactactcccatgccctgtatctggcggagaaccatgcacatcatgagtggtacctg
aagatccagctagaagacattaagaattatcaggaagcccttcgatacatcggcaagctg
ccttttgagcaggcagagagcaacatgaagcgctacggcaagatcctcatgcaccacata
ccagagcagacaactcagttgctgaagggactttgtactgattatcggcccagcctcgaa
ggccgcagcgatagggaggccccaggctgcagggctaactctgaggagttcatccccatc
tttgccaataacccgcgagagctgaaagccttcctagagcacatgagtgaagtgcagcca
gactcgccccagggcatctacgacacactccttgagctgcgactgcagaactgggcccat
gagaaggatccacaggtcaaagagaagcttcacgcagaggccatttccctgctgaagagt
ggtcgcttctgcgacgtctttgacaaggccctggtcctgtgccagatgcacgacttccag
gatggtgtcctttacctttatgagcaggggaagctgttccagcagatcatgcactaccac
atgcagcacgagcagtaccggcaggtcatcaccgtgtgtgagcgccatggggagcaggac
ccctccttgtgggagcaggccctcagctacttcgctcgcaaggaggaggactgcaaggag
tacatggcagctgtcctcaagcatatcgagaacaagaacctcatgccacctcttctagtg
gtgcagaccctggcccacaactccacagccacactctccgtcatcagggactacctggtc
caaaaactacagaaacagagccagcagattgcacaggatgagctgcgggtgcggcggtac
cgagaggagaccacccgtatccgccaggagatccaagagctcaaggccagtcctaagatt
ttccaaaagaccaagtgcagcatctgtaacagtgccttggagttgccctcagtccacttc
ctgtgtggccactccttccaccaacactgcttcgagagttactcggaaagtgatgctgac
tgccccacctgcctccctgaaaaccggaaggtcatggatatgatccgggcccaggaacag
aaacgagatctccatgatcaattccagcatcagctcaagtgctccaatgacagcttttct
gtgattgctgactactttggcagaggtgttttcaacaaattgactctgctgaccgaccct
cccacagccagactgacctccagcctggaggctgggctgcaacgcgacctgctcatgcac
tccaggaggggcacttaa
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