Symphalangus syndactylus (siamang): 129480495
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Entry
129480495 CDS
T10134
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129480495 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssyn03019
]
129480495 (CSTF2T)
Messenger RNA biogenesis [BR:
ssyn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129480495 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
129480495 (CSTF2T)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129480495
NCBI-ProteinID:
XP_055130307
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Position
4:complement(27301745..27304390)
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AA seq
619 aa
AA seq
DB search
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQSVSVSGPGPGPGPGPGPGPGPGLCPGPNVLLNQQ
NPPAPQPQHLARRPVKDIPPLMQTPIQGGIPAPGPIPAAVPGPGPGSLTPGGAMQPQLGM
PGVGPVPLERGQVQMSDPRAPIPRGPMTPGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPR
GYLGPPHQGPPMHHASGHDTRGPSSHEMRGGPLGDPRLLIGEPRGPMIDQRGLPMDGRGS
RDARAMETRAMETEVLETRVMERRGMETCAMETRGMEARGMDARGLEMRGPVPSSRGPMT
GGIQGPGPINIGAGGPPQGPRQVPGISGVGNPGAGMQGTGIQGAGMQGAGIQGGGMQGSG
IQGVSIQGGGIQGASKQGGSQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPE
QRQSILILKEQIQKSTGAS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagacccggcaatggatagatcactgcgttccgtgttcgtg
gggaacattccgtatgaggcaactgaggagcagttaaaggacattttctcggaggttggt
tctgttgtcagtttccggctggtatacgatagagagacgggaaaacccaagggctatggc
ttctgcgaataccaagaccaagagaccgcgcttagtgccatgcggaacctcaatgggcgg
gagttcagtgggagagcgcttcgggtggacaatgctgccagcgaaaagaataaggaggag
ttaaagagcctcgggcctgcagcgcccattattgactcaccctatggggatcccatcgat
ccagaagatgcccctgaatcgattaccagagcagtagccagtctccccccggagcagatg
tttgagctgatgaagcagatgaagctctgtgtccaaaacagccaccaggaagctcgaaac
atgttacttcaaaatccacaattggcttatgcgctgttgcaggcacaagtagtgatgaga
atcatggatccagagattgctctgaaaattctgcatcggaagatacatgtcacaccactg
atcccaggcaaatctcaatctgtgtctgtctctggccctggccctggccctggccctggt
cctggccctggccctggccctgggctctgcccaggacctaatgttctgctgaaccagcag
aatcctccagcccctcagcctcagcatttggctagaagacctgtgaaggacattcctcct
ctgatgcagactcctatccagggtggaattccagctccagggccaataccagctgcagtt
cccggacctggtcctggttccttaactcctggaggagcaatgcagccccaacttggaatg
ccaggggttggcccagtgcctttagagcggggacaagtgcagatgtcagatcctagagct
cctatacctcgtggacccatgactcctggtggtctgcctcctcgaggactgttaggagat
gctccaaatgacccacgtggagggactttgctttcagtcactggagaagtggagcccaga
ggttatctgggtccaccccatcagggtcctcccatgcatcatgcctctggtcatgacact
cgtggcccttcctcacatgagatgaggggagggccattaggagatcccagactgctcatt
ggagagcccagaggccccatgatagatcaaaggggtctacctatggatggtagaggtagt
agagatgctcgagcgatggagactcgcgccatggaaactgaggtcttagagacacgtgta
atggagaggaggggaatggagacctgtgcgatggaaaccagagggatggaagcaagaggc
atggatgcaagaggattggagatgaggggccctgtccccagttcaagaggccctatgact
ggtggaattcagggtcctggtcccattaatataggggcaggtggccctcctcagggaccc
agacaggtcccaggcatttcaggggtggggaatcctggagctggtatgcagggtacaggc
atacaaggagcaggcatgcagggagcaggcatacaaggaggagggatgcagggatcaggc
atacaaggagtcagtatacaaggaggaggtatacagggggcaagcaagcaaggtggaagc
cagcctagcagttttagtcctgggcagagccaggtaactccacaggatcaggaaaaggca
gctttgatcatgcaggttcttcaactgactgcagatcagattgccatgctgccccctgag
caaaggcagagtatcctgattttaaaggaacaaatccagaaatccactggagcttcttga
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