Symphalangus syndactylus (siamang): 129480576
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Entry
129480576 CDS
T10134
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssyn03009
]
129480576 (DDX21)
03036 Chromosome and associated proteins [BR:
ssyn03036
]
129480576 (DDX21)
Enzymes [BR:
ssyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129480576 (DDX21)
Ribosome biogenesis [BR:
ssyn03009
]
Eukaryotic type
Pre-60S particles
Helicases
129480576 (DDX21)
Chromosome and associated proteins [BR:
ssyn03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
129480576 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
AAA_30
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
129480576
NCBI-ProteinID:
XP_055130494
LinkDB
All DBs
Position
4:43363866..43389597
Genome browser
AA seq
783 aa
AA seq
DB search
MPGKLRSDAGLESDTAMKKGETLRKQTEKKEKKEKPKSDKTEEIAEEEETVSPKAKQVKK
KAEPSEVDMNSPKSKKAKKKEEPSQNDVSPKTKSLRKKKEPIEKKVVSSKTKKVIKNEEP
SEEEIDAPKPKKMKKEKEMNGETGEKSPKLKNGFPHPEPDCNPSEAASEESNSEIEQEIP
VEQKEGAFSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSF
AIPLIEKLHGELQDRKRGRPPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTPYGG
QFERMRNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVA
YKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHW
TQRAAVIGDVIRVYSGHQGRTIIFCETKKEAQELSQNSAIKQDAQSLHGDIPQKQREITL
KGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICF
YQHKEEYQLVQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAEK
LIEEKGAVEALAAALAHISGATSVDQRSLINSNVGFVTMILQCSIEMPNISYAWKELKEQ
LGEEIDSKVKGMVFLKGKLGVCFDVPTASVTEIQEKWHDSRRWQLSVATEQPELEGPREG
YGGFRGQREGSRGFRGQRDGNRRFRGQREGSRGPRGQRSGGGNKSNRSQNKGQKRSFSKA
FGQ
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaaaactccgtagtgacgctggtttggaatcagacaccgcaatgaaaaaaggg
gagacactgcgaaagcaaaccgagaagaaagagaaaaaagagaagccaaaatctgataag
actgaagagatagcagaagaggaagaaactgtttcccccaaagctaaacaagttaaaaag
aaagcagagccttctgaagttgacatgaattctcctaaatccaaaaaggcaaaaaagaaa
gaggagccatctcaaaacgacgtttctcctaaaaccaaaagtttgagaaagaaaaaggag
cccattgaaaagaaagtggtttcttctaaaaccaaaaaagtgataaaaaatgaggagcct
tctgaggaggaaatagatgctcctaagcccaagaagatgaagaaagaaaaggaaatgaat
ggagaaactggagagaaaagccccaaactgaagaatggatttcctcatcctgaacctgac
tgtaaccccagtgaagctgccagtgaagaaagtaacagtgagatagagcaggaaatacct
gtggaacaaaaagaaggtgctttctctaattttcccatatctgaagaaactattaagctt
ctcaaaggccgaggagtgaccttcttatttcctatacaagcaaagacattccatcatgtt
tacagcgggaaggacttaattgcacaggcacggacaggaactgggaagacattctccttt
gccatccctttgattgagaaacttcatggggaactgcaagacaggaagagaggccgtccc
cctcaggtactggttcttgcacctacaagagagttggcaaatcaagtaagcaaagacttc
agtgacatcacaaaaaagctgtcagtggcttgtttttatggtggaactccctatggaggt
caatttgaacgcatgaggaatgggattgatatcctggttggaacaccaggtcgtatcaaa
gaccacatacagaatggcaaactagatctcaccaaacttaagcatgttgtcctggatgaa
gtggaccagatgttggatatgggatttgctgatcaagtggaagagattttaagtgtggcg
tacaagaaagattctgaagacaatccccaaacattgcttttttctgcaacttgccctcat
tgggtatttaatgttgccaagaaatacatgaaatctacatatgaacaggtggacctgatt
ggtaaaaagactcagaaaacggcaataactgtggagcatctggctattaagtgccactgg
actcagagggcagcagttattggggatgtcatccgagtatatagtggtcatcaaggacgc
actatcatcttttgtgaaaccaagaaagaagcccaggagctgtcccagaattcagctata
aagcaggatgctcagtccttgcatggagacattccacagaagcaaagggaaatcaccctg
aaaggttttagaaatggtagttttggagttttggtggcaaccaatgtggctgcacgtggg
ttagacatccctgaggttgatttggttatacaaagctctccaccaaaggatgtagagtcc
tacattcatcgatccgggcggacaggcagagctggaaggacgggggtgtgcatctgcttt
tatcagcacaaggaagaatatcaattagtacaagtggagcaaaaagcgggaattaagttc
aaacgaataggtgttccttctgcaacagaaataataaaagcttccagcaaagatgccatc
aggcttttggattccgtgcctcccactgccattagtcacttcaagcaatcagctgagaag
ctgatagaggagaaaggagctgtggaagctctggcagcagcactggcccatatttcaggt
gccacgtccgtagaccagcgctccttgatcaactcaaatgtgggttttgtgaccatgatc
ttgcagtgctcaattgaaatgccaaatattagttatgcttggaaagaacttaaagagcag
ctgggcgaggagattgattctaaagtgaagggaatggtttttctcaaaggaaagctgggt
gtttgctttgatgtacctaccgcatcagtaacagaaatacaggagaaatggcatgattca
cgacgctggcagctctctgtggccacagagcaaccagagctggaaggaccacgggaagga
tatggaggcttcaggggacagcgggaaggcagtcgaggcttcaggggacagcgggacgga
aacagaagattcagaggacagcgggaaggcagtagaggcccgagaggacagcgatcagga
ggtggcaacaaaagtaacagatcccaaaacaaaggccagaagcggagtttcagtaaagca
tttggtcaataa
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