Symphalangus syndactylus (siamang): 129480676
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Entry
129480676 CDS
T10134
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129480676 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssyn04990
]
129480676 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
ssyn04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
129480676 (SYNPO2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129480676
NCBI-ProteinID:
XP_055130674
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Position
4:complement(55436926..55609395)
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AA seq
1261 aa
AA seq
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MGTGDFICISMTGGAPWGFRLQGGKEQKQPLQVAKIRNQSKASGSGLCEGDEVVSINGNP
CADLTYPEVIKLMESITDSLQMLIKRPSSGISEALISENENKNLEHLTHGGYVESTTLQI
RPATKTQCTEFFLAPVKTEVPLAENQRSGPDCASSLKEETGPIYQRAPQMPDSQRGCVAE
ELILREKVEAVQPGPVVELQLSLSQERHKGASGPLVALPGAEKSKSPDPDPNLSHDRIVR
INSIPTNEKADPFLRSSKVIQISSGRELRVIQESEAGDAGLPRVEVILDCSDRQKTEGCR
LQAGKGCVDSPVEGGQSEAPPSLVSFAVSSEGTEQGEDPRSEKDHSRPHKHRARHARLRR
SESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELERE
VDEEEEGGKEDTCEVAFLGASESEVDEELLSDVDDNTQVVNFDWDSRLVDIEKKLNRGDK
MEMLPDTTGKGALMFAKRRERMDQITAQKEEDKVGGTPSREQDAAQTDGLRTMTSYQRKE
EESVRTQSSVSKSYIEVSHGLGHVPQQNGFSGASETANIQRMVPMNRTAKPFPGSVNQPA
TPFSPTRNMTSPIADFPAPPPYSAVTPPPDAFSRGVSSPIAGPAQPPPWPQAAPWSQPAF
YDSSERIASRDERISVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGK
RGTGAGGDSGPEEDYLSLGAEACNFMQSSSAKQKTPPPVAPKPAVKSSSSQPVTPVSPVW
SPGVAPTQPPAFPTSNPSKGTVVSSIKIAQPSYPPARPASALNVAGPFKGPQAAVASQNY
TPKPTVSTPTVNAAQPGAVGPSNELPGMSGRGAQLFAKRQSRMEKYVVDSDTVQAHAARA
QSPTPSLPASWKYSSNVRAPPPVAYNPIHSPSYPLAALKSQPSAAQPSKTGKKKGKKPLN
ALDVMKHQPYQLNASLFTFQPPDAKDGLPQKSSVKVNSALAMKQALPPRPVNAASPTNVQ
ASSVYSVPAYTSPPSFFAEASPPVSASPVPVGIPTSPKQESASSSYFVAPRPKFSAKKSG
VTIQESGRSLSLPGRSVPPTISTSPWVYQPTYSYSSKPTDGLEKANKRPTPWEAAAKSPL
GLVDDAFRPRNIQESIVANVVSAARRKVLPGLPEDWNERLSYIPQTQKAYMGSCGRQEYN
ATVNNNMSTNSQYGSQLPYAYYRQASRNDSEIMSMETRSDYCLPVADYNHNPHPRGWRRQ
T
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgggggattttatctgcatttccatgactggaggggcgccctgggggttcaga
ttgcaaggtggcaaggagcagaagcagcccttacaagttgcaaagattcgaaatcagagc
aaagcctctgggtctgggctctgtgagggagatgaagtggtttccatcaatggcaaccct
tgtgcagatctcacctaccctgaagtcatcaagctcatggaaagcataacagactctctc
caaatgcttatcaaaagaccatccagtggaataagtgaggctttgatatctgaaaatgaa
aacaaaaacctcgagcatctcacacatgggggctatgtggaaagtaccaccctgcagatt
cgaccagccacaaagacccagtgcacagaattcttccttgcccctgtcaagactgaagtt
cccctagctgagaaccaaagaagtggtcccgattgtgcaagcagcttgaaagaagaaaca
ggcccgatctaccaaagggctccccaaatgcctgactcccaaagaggatgcgtggcagaa
gagctgatcttaagggagaaggtagaagcggtacagcctggccctgtggttgagctgcaa
ctgtccctttcacaggagagacataagggcgctagtggccctttagtggctctcccggga
gctgaaaaatctaagtctcctgacccagaccctaacttgtcacatgacaggattgtccgc
ataaattcgatccctactaatgagaaagcagaccctttcctgaggtccagcaaggtaatc
cagatctccagtggcagagagttgagagtgatccaggaaagtgaagcaggagatgcggga
ctgccccgggtggaagtgatcctcgactgctctgacaggcagaagacagaagggtgcagg
cttcaggcaggaaaggggtgtgtggattctccagtggaaggagggcagtcagaagcacct
ccttctctggtatcctttgccgtctcatcagaaggcacagagcagggagaagatccacgc
tcggaaaaggatcacagcagacctcacaagcaccgagcgcggcatgcacggctcaggagg
agtgaaagcctgtcagaaaaacaagtgaaggaagcaaaatctaaatgcaaaagcattgcc
cttcttctaacggatgctcccaaccccaactccaagggggtgttgatgtttaagaagcga
cgtcggagggcgaggaaatacaccctagttagctacggtactggcgagcttgagcgagag
gtggacgaggaggaagaaggtggcaaggaggatacatgtgaagtggcatttcttggtgca
agcgaatcagaggtggatgaagagttattgtctgacgttgacgacaacacacaagttgtg
aactttgactgggattctagactggtggacattgaaaagaaactgaacagaggggacaag
atggagatgttaccagacaccacaggcaagggagccctcatgtttgccaagaggagggag
agaatggatcagatcacagcccaaaaagaagaggacaaggtaggtggaacgccaagcaga
gaacaagatgctgcccagaccgatggcctgagaaccatgacttcttaccaaagaaaggag
gaagagtcggtgagaacgcagagctctgtgagcaaaagctacatcgaggtgagtcatggt
cttggccatgttccccaacagaatggcttcagtggggcatctgagacagcaaacatccag
aggatggtccccatgaatagaacggccaaacccttcccagggtctgtgaatcagccagct
acccccttctcgccaacccgaaacatgacgagtcccattgctgactttcctgcacctcca
ccttactctgcagtcactcctccccctgacgctttctccagaggggtatcaagtccgatt
gctggcccagcacagccccctccatggccccaggctgccccgtggtcccagccagccttt
tacgattcatctgagcgaatagcttcccgagatgagaggatctcagtgccagcaaaaaga
acaggaatattacaggaggccaaaaggagaagcacgacaaaacccatgtttacttttaaa
gagcccaaagtaagcccaaatcctgaactcttgtcactccttcaaaattcagaaggcaaa
cggggcactggagctggaggtgattccggaccggaagaagactacctcagcttgggggca
gaggcttgtaatttcatgcaaagctcctctgccaaacaaaagacccctcctcctgttgct
ccaaaacctgcagtcaagtcctcatcctcccaaccagtaactccagtttccccagtctgg
tctccaggagtggctcccacccaacctcctgccttccccacatccaacccatcaaaaggc
accgttgtctcctccatcaaaatagcccagccttcttaccctcctgcccggcctgcaagt
gctttgaatgtggctggtcccttcaaaggaccacaagcagcagtagccagtcagaattac
acacccaaaccaacagtttccacaccaacagtcaatgctgctcagcctggtgcagtggga
ccatccaatgagcttccaggaatgagtgggagaggagctcagctctttgctaaaaggcag
tcaagaatggagaagtatgtggtcgattcagacacggtgcaggcccacgctgctcgagct
cagtctcccactccatctctccccgccagttggaagtactcctccaatgtccgagcacct
cctcctgtggcctataatcctatccactcgccgtcttacccactggctgctctcaagtct
cagccttcggccgcacagccctccaaaacgggcaagaaaaaggggaagaaacccctcaat
gcattagatgtcatgaagcaccaaccatatcagctcaatgcatccttgtttactttccaa
cctccagatgcaaaggatggcctcccccagaagtcatcagtcaaggtcaattcagccctg
gccatgaaacaagctcttcctccccggccagtgaatgctgcctcacctacgaatgtgcag
gcttcgtcagtgtactcggtaccagcctatacctctcctccttccttctttgcagaggcc
tccccaccagtcagtgcatccccagtgcctgtgggcattcccacctcgccaaagcaagaa
tcagcctcatcatcttattttgtggcaccaaggccaaagttctcggccaagaaaagtggt
gtcacaattcaggagagtgggcgctccctttctcttcctggaagatcagtcccacccacc
atttctacatctccttgggtataccagcctacttatagttactctagtaaaccaactgat
ggactagagaaagcaaacaagagaccaactccttgggaagcagcagcaaaatctcctctc
ggtctagtggatgatgctttcagacccagaaacatccaggagtccattgtggcaaatgtg
gtctcagcagctcggaggaaggtgcttccagggcttccagaggactggaatgaaagactg
tcctatattcctcaaacccagaaagcctatatgggctcatgtggaaggcaagagtataat
gccacagtcaataataatatgtccaccaactcccaatatggttcacagttgccatatgcg
tattataggcaggcttcaagaaatgattccgaaatcatgtccatggaaaccaggtctgat
tactgtcttccagtagctgattacaaccacaacccacacccaaggggatggagacgccaa
acatga
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