Symphalangus syndactylus (siamang): 129480879
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Entry
129480879 CDS
T10134
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
129480879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssyn03036
]
129480879
03400 DNA repair and recombination proteins [BR:
ssyn03400
]
129480879
Chromosome and associated proteins [BR:
ssyn03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
129480879
DNA repair and recombination proteins [BR:
ssyn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
129480879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Spt5-NGN
Motif
Other DBs
NCBI-GeneID:
129480879
NCBI-ProteinID:
XP_055131325
LinkDB
All DBs
Position
4:84021303..84110382
Genome browser
AA seq
1492 aa
AA seq
DB search
MPNEGIPHSSQTQEQDCLQSQPVSNNEEMAIKQESGGDGEVEEYLPFCSVGDGLSTSVVG
CASAALRRGPALLHIDRHQIQAVEPSAQALELQGLGVDVYDQDVLEQGVLQQVDSAIHEA
SRASQLADVEKEYRSVLDDLTSCTTSLRQINKIIEQLSPQAATSRDINRKLDSVKRQKYN
KEQQLKKITAKQKHLQAILGGAEVKIELDHASLEEDAEPGPSSLGSMLMPVQETAWEELI
RTGQMTPFGTQIPQKQEKKPRKIMLNEASGFEKYLADQAKLSFERKKQACNKRAGRKAPA
PVTPPAPVQNKNKPNKKARVLSKKEERLKKHIKKLQRRALQFQGKVGLPKAGRPWGSDMR
PEAEGDSEGEESEYFPTEEEEEEEDDEVEGAEADLSGDGTDYELKPLPKGRKRQKKVPVQ
EIDYDFFPSSGEEAEASPVGGGGGGRKVGRYRDDGDEDYYKQRLRRWNKLRLQDKEKRLK
LEDDSEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQ
IIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETG
SYTHKKEKLIRDVAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLA
CKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASP
VQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFID
SKEVYRILNGEMQIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEADQFGYWKRSGKM
IVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY
NEDTSIFVFLLTTRVGGLGINLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR
LLTAGTIEEKIYHRQIFKQFLTNRVLKDAKQRRFFKSNDLYELFTLTSPDASQSTETSAI
FAGTGSDVQTPKCHLKRRIQPAFGAAHDVPKCKKFPASNISVNDATSSEEKSEAKGAEVN
AVTSNQSDPLKDDPHMSSNVTSNDRLGEETNAVSGPEESSVISGNGECSNSSGTGKTSRP
SGDESIDEKLGLSYKRERPSQAQTESFWENKQMENNFCKHKSKTKHHSVAEEETLEKHLR
PKQKPKNPKHCRDAKFEGTRIPHLVKKRCYQKQDSENKSEAKEQSNDDYVLEKLFKKSVG
VHSVMKHDAIVDGASPDYVLVEAEANRVAQDALKALRLSRQRCLGAVSGVPTWTGHRGIS
GAPAGKKSRFGKKRNSNFSVQHPSSTSPTEKCQDGIMKKEGKDNVPEHFSGRAEDADSSS
RALASSSLLAKMRARNHLILPERLESESGHLQEASALLPTTEHDDLLVEMRNFIAFQAHI
DGQASTREILQEFESKLSASQSCVFRELLRNLCTFHRTSGGEGIWKLKPEYC
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgagggaatcccccactcaagtcaaactcaggagcaagactgtttacagagt
caacctgtcagtaataatgaagaaatggcaatcaagcaagaaagtggtggtgatggggag
gtggaggagtacctgcccttttgttccgtgggtgacgggctgtccacctctgttgtgggg
tgcgcatcagcagccctgaggagagggccagccctgctgcacatcgaccgacatcagatc
caggcggtggagcctagtgcccaggccctagagctgcagggtttgggtgtggatgtctat
gaccaggacgtgctggaacagggtgtgcttcagcaggtagacagtgccatccatgaggcc
agccgtgcctcccagctcgctgacgtggagaaggagtatcggtcggtcctggatgacctc
acgtcatgtacgacatccctaaggcaaatcaataaaattattgaacaacttagccctcaa
gctgccaccagcagagacatcaacaggaaactagattctgtaaaacgacagaagtataat
aaggaacaacagctaaaaaagatcactgcaaaacaaaagcatctccaggccatccttgga
ggagcagaggtgaaaattgaactagatcacgccagtctggaagaggatgcagagccgggg
ccatccagtcttggcagcatgctcatgcctgtccaggagactgcctgggaagagctcatc
cgcactggccagatgacaccttttggtacccagatccctcagaaacaggagaaaaagccc
agaaaaatcatgctcaatgaagcatcaggcttcgaaaagtatttggcagatcaagcaaaa
ctgtcttttgaaaggaagaagcaagcttgtaataaaagagcaggtagaaaagctccagcc
ccagtcacgcctccagccccagtgcaaaataaaaacaaaccaaacaagaaagccagagtt
ctgtccaaaaaagaggaacgtttgaaaaagcacatcaagaaactccagaggagggctttg
cagttccaggggaaagtgggattgccaaaggcagggagaccttgggggtcagacatgagg
ccagaggcagagggagactctgagggtgaagagtctgagtatttccccacagaggaggag
gaagaggaggaagatgatgaggtggagggggcggaggcggacctgtctggagatggtact
gactatgagctgaagcctctgcccaagggccggaaacggcagaagaaagtccccgtgcag
gagattgattacgactttttcccaagttctggggaagaagctgaagcttctcctgtagga
ggaggaggaggaggtcggaaagtgggaagataccgagatgacggagatgaagattattat
aagcagcggttaaggagatggaataaactgagactgcaggacaaagagaaacgtctgaag
ctggaggacgattctgaggaaagcgatgctgaatttgacgaaggttttaaagtgccaggt
tttctgttcaaaaagctttttaagtaccagcagacaggtgttaggtggctgtgggaattg
cactgccagcaggcaggaggaattctgggagatgaaatgggattgggcaagaccatccag
ataattgccttcttggcaggtctgagctacagcaagatcaggactcgtggttcaaattac
aggtttgaggggttgggtccaactgtaattgtctgtccaacaacagtgatgcatcagtgg
gtgaaggaatttcacacgtggtggcctccgttcagagtggcaattctacatgaaaccggt
tcctatacccacaaaaaggagaaactaattcgagatgttgctcattgtcatggaattttg
atcacatcttactcctacattcgactgatgcaggatgacattagcaggtatgactggcac
tatgtgatcttggatgaaggacacaaaattcgaaatccaaatgctgctgtcacccttgct
tgcaaacagtttcgcacccctcatcggatcattctgtctggctcaccgatgcaaaataac
ctccgagagctgtggtcgctctttgacttcatcttcccaggaaagttaggcacgttgcct
gtgtttatggagcagttctccgtccccatcaccatggggggatattcaaatgcttcccca
gtacaggtcaaaactgcttacaagtgtgcatgtgtcttacgagataccataaatccatac
ctactgcggagaatgaagtcagatgtcaagatgagcctttctttgccagataaaaatgaa
caggtcttattttgccgtcttacagatgagcagcataaagtctaccaaaatttcattgat
tccaaagaagtttacaggattctcaatggagagatgcagattttctccggacttatagcc
ttaagaaaaatttgcaaccaccctgatctcttttctggaggtcccaagaatctcaaaggt
cttcctgatgatgaactagaagcagatcagtttgggtactggaaacgttctgggaaaatg
attgttgttgagtctttgttgaaaatatggcacaagcagggtcagcgagtattgctgttt
tctcagtcaaggcagatgctggacatacttgaagtattccttagagcccaaaagtatacc
tatctcaagatggatggtaccactacaatagcttcaagacagccactgattacaagatac
aatgaggacacatccatatttgtgtttcttctgaccacgcgggtgggcggcttaggtatc
aacctgacgggggcaaacagagttgtgatctatgaccccgactggaacccaagcacagac
acacaggcccgggagcgagcatggagaataggccagaagaagcaggtgactgtgtacagg
ctcctgactgcgggcaccattgaagaaaagatctaccaccgacaaatcttcaagcagttt
ttgacaaatagagtgctgaaagacgccaaacaaaggcggtttttcaaatccaatgatctc
tatgagctatttactctgactagtcctgatgcatcccagagcactgaaacaagtgcaatt
tttgcaggaactggatcagatgttcagacacccaaatgccatctaaaaagaaggattcaa
ccagcctttggagcagcccatgatgttccaaaatgcaaaaagttccctgcttctaacata
tctgtaaatgatgccacatcatctgaagagaaatctgaggctaaaggagctgaagtaaat
gcagtaacttctaatcaaagtgatcctttgaaagatgaccctcacatgagtagtaatgta
actagcaatgataggcttggagaagagacaaatgcagtatctggaccagaagagtcgtca
gtgattagtggaaatggggaatgttcaaattcttcaggaacaggcaaaacttctaggcca
tctggtgatgaaagcattgatgaaaagttaggtctttcttacaaaagagaaagacccagc
caggctcaaacagaatctttttgggagaataaacaaatggaaaataatttttgtaagcac
aagtcaaaaacaaaacatcatagtgtggcagaagaagagaccctggagaaacatctgaga
ccaaagcaaaagcctaagaaccctaagcattgcagagacgcgaagtttgaaggaactcga
attccacacctggtgaagaaaaggtgttaccagaagcaagacagtgaaaacaagagtgag
gccaaggaacagagcaatgatgattatgttttggaaaagcttttcaaaaaatcagttggc
gtgcacagtgtcatgaagcacgatgccatcgtggatggagccagcccagattatgtactg
gtggaggcagaagccaaccgagtggcccaggatgccttgaaagcactgaggctctctcgt
cagcggtgtctgggagcagtgtctggtgttcccacctggactggccacagggggatttct
ggtgcaccagcaggaaaaaagagtagatttggtaagaaaaggaattctaacttctctgtg
cagcatccttcatcaacatctccaacagagaagtgccaggatggcatcatgaaaaaggag
ggaaaagataatgtccctgagcattttagtggaagagcagaagatgcagactcttcatcc
agggccctcgcttcctcctcactcttggctaaaatgagagctagaaaccacctgattctg
ccagagcgtttagaaagtgaaagcggacacctgcaggaagcttctgccctgctgcccacc
acagaacacgatgaccttctggtggagatgagaaacttcattgctttccaggcccacatt
gatggccaggccagcactagggagatactgcaggagtttgaatccaagttatcagcgtcg
cagtcttgtgtcttccgagaactattgagaaatctgtgcactttccatagaacttctggt
ggtgaaggaatttggaaactcaagccagaatactgctaa
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integrated database retrieval system
