Symphalangus syndactylus (siamang): 129482438
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Entry
129482438 CDS
T10134
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X6
KO
K08532
RAR-related orphan receptor alpha
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04659
Th17 cell differentiation
ssyn04710
Circadian rhythm
ssyn05017
Spinocerebellar ataxia
ssyn05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
129482438 (RORA)
09159 Environmental adaptation
04710 Circadian rhythm
129482438 (RORA)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
129482438 (RORA)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
129482438 (RORA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssyn03000
]
129482438 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssyn03310
]
129482438 (RORA)
Transcription factors [BR:
ssyn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129482438 (RORA)
Nuclear receptors [BR:
ssyn03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
129482438 (RORA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129482438
NCBI-ProteinID:
XP_055134268
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Position
5:45003642..45743899
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AA seq
523 aa
AA seq
DB search
MESAPAAPDPAASEPGSSGADAAAGSRETPLNQESARKSEPPAPVRRQSYSSTSRGISVT
KKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRT
SRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAE
PLTPTYNISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIK
PEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITW
QTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGS
LEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEI
ALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRAL
CGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgccagcgagccaggcagcagcggcgcg
gacgcggccgccggctccagggagaccccgctgaaccaggaatccgcccgcaagagcgag
ccgcctgccccggtgcgcagacagagctattccagcaccagcagaggtatctcagtaacg
aagaagacacatacatctcaaattgaaattattccatgcaagatctgtggagacaaatca
tcaggaatccattatggtgtcattacatgtgaaggctgcaagggatttttcaggagaagt
cagcaaagcaatgccacctactcctgtcctcgtcagaagaactgtttgattgatcgaacc
agtagaaaccgctgccaacactgtcgattacagaaatgccttgccgtagggatgtctcga
gatgctgtaaaatttggccgaatgtcaaaaaagcagagagacagcttgtatgcagaagtg
cagaaacaccggatgcagcagcagcagcgtgaccaccagcagcagcctggagaggctgag
ccgctgacgcccacctacaacatctcggccaacgggctgacggaacttcacgacgacctc
agtaactacattgacgggcacacccctgaggggagtaaggcagactccgctgtcagcagc
ttctacctggacatacagccttccccagaccagtcaggtcttgatatcaatggaatcaaa
ccagaaccaatatgtgactacacaccagcatcaggcttctttccctactgttcgttcacc
aatggtgagacgtccccaactgtatccatggcagaattagaacaccttgcacagaatata
tctaaatcgcatctggaaacatgccaatacttgagagaagagctccagcagataacgtgg
cagacctttttgcaggaagaaattgagaactatcaaaacaagcagcgggaggtgatgtgg
caattgtgtgccatcaaaattacagaagctatacagtatgtggtggagtttgccaaacgc
attgatggatttatggaactgtgtcaaaatgatcaaattgtgcttctaaaagcaggttct
ctagaggtggtgtttatcagaatgtgccgtgcctttgactctcagaacaacaccgtgtac
tttgatgggaagtatgccagccctgacgtcttcaaatccttaggttgtgaagattttatt
agctttgtgtttgaatttgggaagagtttatgttctatgcacctgactgaagatgaaatt
gcattattttctgcattcgtactgatgtcagcagatcgctcatggctgcaagaaaaggta
aaaattgaaaaattgcaacagaaaattcagctagctcttcaacacgtcctacagaagaat
caccgagaagatggaatactaacaaagttaatatgcaaggtgtctacattaagagcctta
tgtggacgacatacagaaaagctaatggcatttaaagcaatatacccagacattgtgcga
cttcattttcctccattatacaaggagttgttcacttcagaatttgagccagcaatgcaa
attgatgggtaa
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